Gene : Thecc1EG021460 T. cacao v1.1

Defline:  (1 of 7) K07937 - ADP-ribosylation factor 1 (ARF1) Genomic Order:  3096
Name:  ? Thecc1EG021460 Secondary Identifier:  ? PAC:27452903

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021460 0.5kb upstream 0.5kb upstream 2344 true scaffold_4: 33181904-33184247 Theobroma cacao
Thecc1EG021460 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 33183748-33184247 Theobroma cacao
Thecc1EG021460 0.5kb downstream 0.5kb downstream 2344 true scaffold_4: 33181404-33183747 Theobroma cacao
Thecc1EG021460 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 33181404-33181903 Theobroma cacao
Thecc1EG021460 1.0kb upstream 1.0kb upstream 2844 true scaffold_4: 33181904-33184747 Theobroma cacao
Thecc1EG021460 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 33183748-33184747 Theobroma cacao
Thecc1EG021460 1.0kb downstream 1.0kb downstream 2844 true scaffold_4: 33180904-33183747 Theobroma cacao
Thecc1EG021460 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 33180904-33181903 Theobroma cacao
Thecc1EG021460 2.0kb upstream 2.0kb upstream 3844 true scaffold_4: 33181904-33185747 Theobroma cacao
Thecc1EG021460 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 33183748-33185747 Theobroma cacao
Thecc1EG021460 2.0kb downstream 2.0kb downstream 3844 true scaffold_4: 33179904-33183747 Theobroma cacao
Thecc1EG021460 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 33179904-33181903 Theobroma cacao
Thecc1EG021460 5.0kb upstream 5.0kb upstream 6844 true scaffold_4: 33181904-33188747 Theobroma cacao
Thecc1EG021460 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 33183748-33188747 Theobroma cacao
Thecc1EG021460 5.0kb downstream 5.0kb downstream 6844 true scaffold_4: 33176904-33183747 Theobroma cacao
Thecc1EG021460 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 33176904-33181903 Theobroma cacao
Thecc1EG021460 10.0kb upstream 10.0kb upstream 11844 true scaffold_4: 33181904-33193747 Theobroma cacao
Thecc1EG021460 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 33183748-33193747 Theobroma cacao
Thecc1EG021460 10.0kb downstream 10.0kb downstream 11844 true scaffold_4: 33171904-33183747 Theobroma cacao
Thecc1EG021460 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 33171904-33181903 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841569 5264 Brassicales-Malvales View MSA
124322959 5266 SBM View MSA
124252647 5268 Malvidae View MSA
124074730 5270 Rosid View MSA
123752155 5271 Pentapetalae View MSA
122796047 5272 Eudicot View MSA
122049759 5273 Angiosperm View MSA
123429166 5275 Viridiplantae View MSA
121351098 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain