Gene : Thecc1EG021557 T. cacao v1.1
Defline:  (1 of 1) PTHR11592:SF33 - GLUTATHIONE PEROXIDASE 2-RELATED Genomic Order:  36
Name:  ? Thecc1EG021557 Secondary Identifier:  ? PAC:27422802
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-4081 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021557 0.5kb upstream 0.5kb upstream 3469 true scaffold_5: 204164-207632 Theobroma cacao
Thecc1EG021557 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 204164-204663 Theobroma cacao
Thecc1EG021557 0.5kb downstream 0.5kb downstream 3469 true scaffold_5: 204664-208132 Theobroma cacao
Thecc1EG021557 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 207633-208132 Theobroma cacao
Thecc1EG021557 1.0kb upstream 1.0kb upstream 3969 true scaffold_5: 203664-207632 Theobroma cacao
Thecc1EG021557 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 203664-204663 Theobroma cacao
Thecc1EG021557 1.0kb downstream 1.0kb downstream 3969 true scaffold_5: 204664-208632 Theobroma cacao
Thecc1EG021557 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 207633-208632 Theobroma cacao
Thecc1EG021557 2.0kb upstream 2.0kb upstream 4969 true scaffold_5: 202664-207632 Theobroma cacao
Thecc1EG021557 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 202664-204663 Theobroma cacao
Thecc1EG021557 2.0kb downstream 2.0kb downstream 4969 true scaffold_5: 204664-209632 Theobroma cacao
Thecc1EG021557 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 207633-209632 Theobroma cacao
Thecc1EG021557 5.0kb upstream 5.0kb upstream 7969 true scaffold_5: 199664-207632 Theobroma cacao
Thecc1EG021557 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 199664-204663 Theobroma cacao
Thecc1EG021557 5.0kb downstream 5.0kb downstream 7969 true scaffold_5: 204664-212632 Theobroma cacao
Thecc1EG021557 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 207633-212632 Theobroma cacao
Thecc1EG021557 10.0kb upstream 10.0kb upstream 12969 true scaffold_5: 194664-207632 Theobroma cacao
Thecc1EG021557 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 194664-204663 Theobroma cacao
Thecc1EG021557 10.0kb downstream 10.0kb downstream 12969 true scaffold_5: 204664-217632 Theobroma cacao
Thecc1EG021557 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 207633-217632 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839339 5264 Brassicales-Malvales View MSA
124341945 5266 SBM View MSA
124254095 5268 Malvidae View MSA
124060403 5270 Rosid View MSA
123752336 5271 Pentapetalae View MSA
122792727 5272 Eudicot View MSA
122049273 5273 Angiosperm View MSA
121349724 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain