Gene : Thecc1EG021780 T. cacao v1.1
Defline:  (1 of 2) K02917 - large subunit ribosomal protein L35Ae (RP-L35Ae, RPL35A) Genomic Order:  234
Name:  ? Thecc1EG021780 Secondary Identifier:  ? PAC:27423644
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021780 0.5kb upstream 0.5kb upstream 1845 true scaffold_5: 1180269-1182113 Theobroma cacao
Thecc1EG021780 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1181614-1182113 Theobroma cacao
Thecc1EG021780 0.5kb downstream 0.5kb downstream 1845 true scaffold_5: 1179769-1181613 Theobroma cacao
Thecc1EG021780 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1179769-1180268 Theobroma cacao
Thecc1EG021780 1.0kb upstream 1.0kb upstream 2345 true scaffold_5: 1180269-1182613 Theobroma cacao
Thecc1EG021780 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1181614-1182613 Theobroma cacao
Thecc1EG021780 1.0kb downstream 1.0kb downstream 2345 true scaffold_5: 1179269-1181613 Theobroma cacao
Thecc1EG021780 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1179269-1180268 Theobroma cacao
Thecc1EG021780 2.0kb upstream 2.0kb upstream 3345 true scaffold_5: 1180269-1183613 Theobroma cacao
Thecc1EG021780 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1181614-1183613 Theobroma cacao
Thecc1EG021780 2.0kb downstream 2.0kb downstream 3345 true scaffold_5: 1178269-1181613 Theobroma cacao
Thecc1EG021780 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1178269-1180268 Theobroma cacao
Thecc1EG021780 5.0kb upstream 5.0kb upstream 6345 true scaffold_5: 1180269-1186613 Theobroma cacao
Thecc1EG021780 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1181614-1186613 Theobroma cacao
Thecc1EG021780 5.0kb downstream 5.0kb downstream 6345 true scaffold_5: 1175269-1181613 Theobroma cacao
Thecc1EG021780 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1175269-1180268 Theobroma cacao
Thecc1EG021780 10.0kb upstream 10.0kb upstream 11345 true scaffold_5: 1180269-1191613 Theobroma cacao
Thecc1EG021780 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1181614-1191613 Theobroma cacao
Thecc1EG021780 10.0kb downstream 10.0kb downstream 11345 true scaffold_5: 1170269-1181613 Theobroma cacao
Thecc1EG021780 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1170269-1180268 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838060 5264 Brassicales-Malvales View MSA
124350653 5266 SBM View MSA
124239644 5268 Malvidae View MSA
124063370 5270 Rosid View MSA
123751278 5271 Pentapetalae View MSA
122792399 5272 Eudicot View MSA
122043317 5273 Angiosperm View MSA
121349974 5274 Embryophyte View MSA
123428152 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain