Gene : Thecc1EG021726 T. cacao v1.1
Defline:  (1 of 4) K01988 - lactosylceramide 4-alpha-galactosyltransferase (A4GALT) Genomic Order:  190
Name:  ? Thecc1EG021726 Secondary Identifier:  ? PAC:27423351
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021726 0.5kb upstream 0.5kb upstream 2608 true scaffold_5: 955899-958506 Theobroma cacao
Thecc1EG021726 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 955899-956398 Theobroma cacao
Thecc1EG021726 0.5kb downstream 0.5kb downstream 2608 true scaffold_5: 956399-959006 Theobroma cacao
Thecc1EG021726 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 958507-959006 Theobroma cacao
Thecc1EG021726 1.0kb upstream 1.0kb upstream 3108 true scaffold_5: 955399-958506 Theobroma cacao
Thecc1EG021726 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 955399-956398 Theobroma cacao
Thecc1EG021726 1.0kb downstream 1.0kb downstream 3108 true scaffold_5: 956399-959506 Theobroma cacao
Thecc1EG021726 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 958507-959506 Theobroma cacao
Thecc1EG021726 2.0kb upstream 2.0kb upstream 4108 true scaffold_5: 954399-958506 Theobroma cacao
Thecc1EG021726 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 954399-956398 Theobroma cacao
Thecc1EG021726 2.0kb downstream 2.0kb downstream 4108 true scaffold_5: 956399-960506 Theobroma cacao
Thecc1EG021726 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 958507-960506 Theobroma cacao
Thecc1EG021726 5.0kb upstream 5.0kb upstream 7108 true scaffold_5: 951399-958506 Theobroma cacao
Thecc1EG021726 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 951399-956398 Theobroma cacao
Thecc1EG021726 5.0kb downstream 5.0kb downstream 7108 true scaffold_5: 956399-963506 Theobroma cacao
Thecc1EG021726 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 958507-963506 Theobroma cacao
Thecc1EG021726 10.0kb upstream 10.0kb upstream 12108 true scaffold_5: 946399-958506 Theobroma cacao
Thecc1EG021726 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 946399-956398 Theobroma cacao
Thecc1EG021726 10.0kb downstream 10.0kb downstream 12108 true scaffold_5: 956399-968506 Theobroma cacao
Thecc1EG021726 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 958507-968506 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123820222 5264 Brassicales-Malvales Singleton cluster - no MSA
124349102 5266 SBM View MSA
124244355 5268 Malvidae View MSA
124061006 5270 Rosid View MSA
123741255 5271 Pentapetalae View MSA
122792990 5272 Eudicot View MSA
122047260 5273 Angiosperm View MSA
121347765 5274 Embryophyte View MSA
123425560 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain