Gene : Thecc1EG021796 T. cacao v1.1

Defline:  (1 of 2) PTHR10641//PTHR10641:SF524 - MYB-LIKE DNA-BINDING PROTEIN MYB // ATMYB1 PROTEIN Genomic Order:  249
Name:  ? Thecc1EG021796 Secondary Identifier:  ? PAC:27420768

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021796 0.5kb upstream 0.5kb upstream 3449 true scaffold_5: 1245245-1248693 Theobroma cacao
Thecc1EG021796 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 1245245-1245744 Theobroma cacao
Thecc1EG021796 0.5kb downstream 0.5kb downstream 3449 true scaffold_5: 1245745-1249193 Theobroma cacao
Thecc1EG021796 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 1248694-1249193 Theobroma cacao
Thecc1EG021796 1.0kb upstream 1.0kb upstream 3949 true scaffold_5: 1244745-1248693 Theobroma cacao
Thecc1EG021796 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 1244745-1245744 Theobroma cacao
Thecc1EG021796 1.0kb downstream 1.0kb downstream 3949 true scaffold_5: 1245745-1249693 Theobroma cacao
Thecc1EG021796 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 1248694-1249693 Theobroma cacao
Thecc1EG021796 2.0kb upstream 2.0kb upstream 4949 true scaffold_5: 1243745-1248693 Theobroma cacao
Thecc1EG021796 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 1243745-1245744 Theobroma cacao
Thecc1EG021796 2.0kb downstream 2.0kb downstream 4949 true scaffold_5: 1245745-1250693 Theobroma cacao
Thecc1EG021796 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 1248694-1250693 Theobroma cacao
Thecc1EG021796 5.0kb upstream 5.0kb upstream 7949 true scaffold_5: 1240745-1248693 Theobroma cacao
Thecc1EG021796 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 1240745-1245744 Theobroma cacao
Thecc1EG021796 5.0kb downstream 5.0kb downstream 7949 true scaffold_5: 1245745-1253693 Theobroma cacao
Thecc1EG021796 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 1248694-1253693 Theobroma cacao
Thecc1EG021796 10.0kb upstream 10.0kb upstream 12949 true scaffold_5: 1235745-1248693 Theobroma cacao
Thecc1EG021796 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 1235745-1245744 Theobroma cacao
Thecc1EG021796 10.0kb downstream 10.0kb downstream 12949 true scaffold_5: 1245745-1258693 Theobroma cacao
Thecc1EG021796 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 1248694-1258693 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831131 5264 Brassicales-Malvales View MSA
124344291 5266 SBM View MSA
124244669 5268 Malvidae View MSA
124065545 5270 Rosid View MSA
123745046 5271 Pentapetalae View MSA
122792993 5272 Eudicot View MSA
122045761 5273 Angiosperm View MSA
123429079 5275 Viridiplantae View MSA
121346052 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain