Gene : Thecc1EG021983 T. cacao v1.1
Defline:  (1 of 467) PF13041 - PPR repeat family (PPR_2) Genomic Order:  421
Name:  ? Thecc1EG021983 Secondary Identifier:  ? PAC:27424831
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021983 0.5kb upstream 0.5kb upstream 3852 true scaffold_5: 2069890-2073741 Theobroma cacao
Thecc1EG021983 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2073242-2073741 Theobroma cacao
Thecc1EG021983 0.5kb downstream 0.5kb downstream 3852 true scaffold_5: 2069390-2073241 Theobroma cacao
Thecc1EG021983 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2069390-2069889 Theobroma cacao
Thecc1EG021983 1.0kb upstream 1.0kb upstream 4352 true scaffold_5: 2069890-2074241 Theobroma cacao
Thecc1EG021983 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2073242-2074241 Theobroma cacao
Thecc1EG021983 1.0kb downstream 1.0kb downstream 4352 true scaffold_5: 2068890-2073241 Theobroma cacao
Thecc1EG021983 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2068890-2069889 Theobroma cacao
Thecc1EG021983 2.0kb upstream 2.0kb upstream 5352 true scaffold_5: 2069890-2075241 Theobroma cacao
Thecc1EG021983 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2073242-2075241 Theobroma cacao
Thecc1EG021983 2.0kb downstream 2.0kb downstream 5352 true scaffold_5: 2067890-2073241 Theobroma cacao
Thecc1EG021983 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2067890-2069889 Theobroma cacao
Thecc1EG021983 5.0kb upstream 5.0kb upstream 8352 true scaffold_5: 2069890-2078241 Theobroma cacao
Thecc1EG021983 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2073242-2078241 Theobroma cacao
Thecc1EG021983 5.0kb downstream 5.0kb downstream 8352 true scaffold_5: 2064890-2073241 Theobroma cacao
Thecc1EG021983 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2064890-2069889 Theobroma cacao
Thecc1EG021983 10.0kb upstream 10.0kb upstream 13352 true scaffold_5: 2069890-2083241 Theobroma cacao
Thecc1EG021983 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2073242-2083241 Theobroma cacao
Thecc1EG021983 10.0kb downstream 10.0kb downstream 13352 true scaffold_5: 2059890-2073241 Theobroma cacao
Thecc1EG021983 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2059890-2069889 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830394 5264 Brassicales-Malvales View MSA
124343968 5266 SBM View MSA
124241547 5268 Malvidae View MSA
124068324 5270 Rosid View MSA
123737648 5271 Pentapetalae View MSA
122793672 5272 Eudicot View MSA
122045784 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain