Gene : Thecc1EG022242 T. cacao v1.1

Defline:  (1 of 1) K14821 - bud site selection protein 20 (BUD20) Genomic Order:  645
Name:  ? Thecc1EG022242 Secondary Identifier:  ? PAC:27423302

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022242 0.5kb upstream 0.5kb upstream 3523 true scaffold_5: 3340215-3343737 Theobroma cacao
Thecc1EG022242 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 3340215-3340714 Theobroma cacao
Thecc1EG022242 0.5kb downstream 0.5kb downstream 3523 true scaffold_5: 3340715-3344237 Theobroma cacao
Thecc1EG022242 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 3343738-3344237 Theobroma cacao
Thecc1EG022242 1.0kb upstream 1.0kb upstream 4023 true scaffold_5: 3339715-3343737 Theobroma cacao
Thecc1EG022242 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 3339715-3340714 Theobroma cacao
Thecc1EG022242 1.0kb downstream 1.0kb downstream 4023 true scaffold_5: 3340715-3344737 Theobroma cacao
Thecc1EG022242 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 3343738-3344737 Theobroma cacao
Thecc1EG022242 2.0kb upstream 2.0kb upstream 5023 true scaffold_5: 3338715-3343737 Theobroma cacao
Thecc1EG022242 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 3338715-3340714 Theobroma cacao
Thecc1EG022242 2.0kb downstream 2.0kb downstream 5023 true scaffold_5: 3340715-3345737 Theobroma cacao
Thecc1EG022242 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 3343738-3345737 Theobroma cacao
Thecc1EG022242 5.0kb upstream 5.0kb upstream 8023 true scaffold_5: 3335715-3343737 Theobroma cacao
Thecc1EG022242 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 3335715-3340714 Theobroma cacao
Thecc1EG022242 5.0kb downstream 5.0kb downstream 8023 true scaffold_5: 3340715-3348737 Theobroma cacao
Thecc1EG022242 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 3343738-3348737 Theobroma cacao
Thecc1EG022242 10.0kb upstream 10.0kb upstream 13023 true scaffold_5: 3330715-3343737 Theobroma cacao
Thecc1EG022242 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 3330715-3340714 Theobroma cacao
Thecc1EG022242 10.0kb downstream 10.0kb downstream 13023 true scaffold_5: 3340715-3353737 Theobroma cacao
Thecc1EG022242 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 3343738-3353737 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827549 5264 Brassicales-Malvales View MSA
124338209 5266 SBM View MSA
124250455 5268 Malvidae View MSA
124062225 5270 Rosid View MSA
123752309 5271 Pentapetalae View MSA
122787626 5272 Eudicot View MSA
122041921 5273 Angiosperm View MSA
123428955 5275 Viridiplantae View MSA
121346205 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain