Gene : Thecc1EG022118 T. cacao v1.1

Defline:  Uncharacterized protein (51%P) Genomic Order:  543
Name:  ? Thecc1EG022118 Secondary Identifier:  ? PAC:27424606

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022118 0.5kb upstream 0.5kb upstream 1990 true scaffold_5: 2703022-2705011 Theobroma cacao
Thecc1EG022118 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2704512-2705011 Theobroma cacao
Thecc1EG022118 0.5kb downstream 0.5kb downstream 1990 true scaffold_5: 2702522-2704511 Theobroma cacao
Thecc1EG022118 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2702522-2703021 Theobroma cacao
Thecc1EG022118 1.0kb upstream 1.0kb upstream 2490 true scaffold_5: 2703022-2705511 Theobroma cacao
Thecc1EG022118 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2704512-2705511 Theobroma cacao
Thecc1EG022118 1.0kb downstream 1.0kb downstream 2490 true scaffold_5: 2702022-2704511 Theobroma cacao
Thecc1EG022118 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2702022-2703021 Theobroma cacao
Thecc1EG022118 2.0kb upstream 2.0kb upstream 3490 true scaffold_5: 2703022-2706511 Theobroma cacao
Thecc1EG022118 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2704512-2706511 Theobroma cacao
Thecc1EG022118 2.0kb downstream 2.0kb downstream 3490 true scaffold_5: 2701022-2704511 Theobroma cacao
Thecc1EG022118 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2701022-2703021 Theobroma cacao
Thecc1EG022118 5.0kb upstream 5.0kb upstream 6490 true scaffold_5: 2703022-2709511 Theobroma cacao
Thecc1EG022118 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2704512-2709511 Theobroma cacao
Thecc1EG022118 5.0kb downstream 5.0kb downstream 6490 true scaffold_5: 2698022-2704511 Theobroma cacao
Thecc1EG022118 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2698022-2703021 Theobroma cacao
Thecc1EG022118 10.0kb upstream 10.0kb upstream 11490 true scaffold_5: 2703022-2714511 Theobroma cacao
Thecc1EG022118 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2704512-2714511 Theobroma cacao
Thecc1EG022118 10.0kb downstream 10.0kb downstream 11490 true scaffold_5: 2693022-2704511 Theobroma cacao
Thecc1EG022118 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2693022-2703021 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824317 5264 Brassicales-Malvales View MSA
124351048 5266 SBM View MSA
124246544 5268 Malvidae View MSA
124070867 5270 Rosid View MSA
123750914 5271 Pentapetalae View MSA
122795249 5272 Eudicot View MSA
122048968 5273 Angiosperm View MSA
121350568 5274 Embryophyte View MSA
123381799 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain