Gene : Thecc1EG022352 T. cacao v1.1
Defline:  (1 of 1) PTHR10209//PTHR10209:SF152 - OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN // 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE-RELATED Genomic Order:  717
Name:  ? Thecc1EG022352 Secondary Identifier:  ? PAC:27425416
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY1F-823 Theobroma cacao pathologic  
Tcacao PWY1F-FLAVSYN Theobroma cacao pathologic  
Tcacao PWY-5059 Theobroma cacao pathologic  
Tcacao PWY-5152 Theobroma cacao pathologic  
Tcacao PWY-6787 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022352 0.5kb upstream 0.5kb upstream 3487 true scaffold_5: 4080175-4083661 Theobroma cacao
Thecc1EG022352 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 4083162-4083661 Theobroma cacao
Thecc1EG022352 0.5kb downstream 0.5kb downstream 3487 true scaffold_5: 4079675-4083161 Theobroma cacao
Thecc1EG022352 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 4079675-4080174 Theobroma cacao
Thecc1EG022352 1.0kb upstream 1.0kb upstream 3987 true scaffold_5: 4080175-4084161 Theobroma cacao
Thecc1EG022352 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 4083162-4084161 Theobroma cacao
Thecc1EG022352 1.0kb downstream 1.0kb downstream 3987 true scaffold_5: 4079175-4083161 Theobroma cacao
Thecc1EG022352 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 4079175-4080174 Theobroma cacao
Thecc1EG022352 2.0kb upstream 2.0kb upstream 4987 true scaffold_5: 4080175-4085161 Theobroma cacao
Thecc1EG022352 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 4083162-4085161 Theobroma cacao
Thecc1EG022352 2.0kb downstream 2.0kb downstream 4987 true scaffold_5: 4078175-4083161 Theobroma cacao
Thecc1EG022352 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 4078175-4080174 Theobroma cacao
Thecc1EG022352 5.0kb upstream 5.0kb upstream 7987 true scaffold_5: 4080175-4088161 Theobroma cacao
Thecc1EG022352 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 4083162-4088161 Theobroma cacao
Thecc1EG022352 5.0kb downstream 5.0kb downstream 7987 true scaffold_5: 4075175-4083161 Theobroma cacao
Thecc1EG022352 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 4075175-4080174 Theobroma cacao
Thecc1EG022352 10.0kb upstream 10.0kb upstream 12987 true scaffold_5: 4080175-4093161 Theobroma cacao
Thecc1EG022352 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 4083162-4093161 Theobroma cacao
Thecc1EG022352 10.0kb downstream 10.0kb downstream 12987 true scaffold_5: 4070175-4083161 Theobroma cacao
Thecc1EG022352 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 4070175-4080174 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837826 5264 Brassicales-Malvales View MSA
124349798 5266 SBM View MSA
124248174 5268 Malvidae View MSA
124071702 5270 Rosid View MSA
123753331 5271 Pentapetalae View MSA
122797647 5272 Eudicot View MSA
122051611 5273 Angiosperm View MSA
123429101 5275 Viridiplantae View MSA
121351374 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain