Gene : Thecc1EG022348 T. cacao v1.1
Defline:  (1 of 1) KOG0933//KOG0978//KOG0993//KOG2685//KOG4593//KOG4673 - Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) // E3 ubiquitin ligase involved in syntaxin degradation // Rab5 GTPase effector Rabaptin-5 // Cystoskeletal protein Tektin // Mitotic checkpoint protein MAD1 // Transcription factor TMF, TATA element modulatory factor Genomic Order:  713
Name:  ? Thecc1EG022348 Secondary Identifier:  ? PAC:27422946
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022348 0.5kb upstream 0.5kb upstream 13983 true scaffold_5: 4049999-4063981 Theobroma cacao
Thecc1EG022348 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 4063482-4063981 Theobroma cacao
Thecc1EG022348 0.5kb downstream 0.5kb downstream 13983 true scaffold_5: 4049499-4063481 Theobroma cacao
Thecc1EG022348 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 4049499-4049998 Theobroma cacao
Thecc1EG022348 1.0kb upstream 1.0kb upstream 14483 true scaffold_5: 4049999-4064481 Theobroma cacao
Thecc1EG022348 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 4063482-4064481 Theobroma cacao
Thecc1EG022348 1.0kb downstream 1.0kb downstream 14483 true scaffold_5: 4048999-4063481 Theobroma cacao
Thecc1EG022348 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 4048999-4049998 Theobroma cacao
Thecc1EG022348 2.0kb upstream 2.0kb upstream 15483 true scaffold_5: 4049999-4065481 Theobroma cacao
Thecc1EG022348 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 4063482-4065481 Theobroma cacao
Thecc1EG022348 2.0kb downstream 2.0kb downstream 15483 true scaffold_5: 4047999-4063481 Theobroma cacao
Thecc1EG022348 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 4047999-4049998 Theobroma cacao
Thecc1EG022348 5.0kb upstream 5.0kb upstream 18483 true scaffold_5: 4049999-4068481 Theobroma cacao
Thecc1EG022348 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 4063482-4068481 Theobroma cacao
Thecc1EG022348 5.0kb downstream 5.0kb downstream 18483 true scaffold_5: 4044999-4063481 Theobroma cacao
Thecc1EG022348 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 4044999-4049998 Theobroma cacao
Thecc1EG022348 10.0kb upstream 10.0kb upstream 23483 true scaffold_5: 4049999-4073481 Theobroma cacao
Thecc1EG022348 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 4063482-4073481 Theobroma cacao
Thecc1EG022348 10.0kb downstream 10.0kb downstream 23483 true scaffold_5: 4039999-4063481 Theobroma cacao
Thecc1EG022348 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 4039999-4049998 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825681 5264 Brassicales-Malvales View MSA
124320710 5266 SBM View MSA
124253325 5268 Malvidae View MSA
124071958 5270 Rosid View MSA
123751263 5271 Pentapetalae View MSA
122794773 5272 Eudicot View MSA
122048313 5273 Angiosperm View MSA
121348283 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain