Gene : Thecc1EG022740 T. cacao v1.1
Defline:  (1 of 230) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H Genomic Order:  947
Name:  ? Thecc1EG022740 Secondary Identifier:  ? PAC:27425123
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022740 0.5kb upstream 0.5kb upstream 3816 true scaffold_5: 7048829-7052644 Theobroma cacao
Thecc1EG022740 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 7052145-7052644 Theobroma cacao
Thecc1EG022740 0.5kb downstream 0.5kb downstream 3816 true scaffold_5: 7048329-7052144 Theobroma cacao
Thecc1EG022740 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 7048329-7048828 Theobroma cacao
Thecc1EG022740 1.0kb upstream 1.0kb upstream 4316 true scaffold_5: 7048829-7053144 Theobroma cacao
Thecc1EG022740 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 7052145-7053144 Theobroma cacao
Thecc1EG022740 1.0kb downstream 1.0kb downstream 4316 true scaffold_5: 7047829-7052144 Theobroma cacao
Thecc1EG022740 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 7047829-7048828 Theobroma cacao
Thecc1EG022740 2.0kb upstream 2.0kb upstream 5316 true scaffold_5: 7048829-7054144 Theobroma cacao
Thecc1EG022740 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 7052145-7054144 Theobroma cacao
Thecc1EG022740 2.0kb downstream 2.0kb downstream 5316 true scaffold_5: 7046829-7052144 Theobroma cacao
Thecc1EG022740 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 7046829-7048828 Theobroma cacao
Thecc1EG022740 5.0kb upstream 5.0kb upstream 8316 true scaffold_5: 7048829-7057144 Theobroma cacao
Thecc1EG022740 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 7052145-7057144 Theobroma cacao
Thecc1EG022740 5.0kb downstream 5.0kb downstream 8316 true scaffold_5: 7043829-7052144 Theobroma cacao
Thecc1EG022740 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 7043829-7048828 Theobroma cacao
Thecc1EG022740 10.0kb upstream 10.0kb upstream 13316 true scaffold_5: 7048829-7062144 Theobroma cacao
Thecc1EG022740 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 7052145-7062144 Theobroma cacao
Thecc1EG022740 10.0kb downstream 10.0kb downstream 13316 true scaffold_5: 7038829-7052144 Theobroma cacao
Thecc1EG022740 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 7038829-7048828 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123819876 5264 Brassicales-Malvales Singleton cluster - no MSA
124316107 5266 SBM Singleton cluster - no MSA
124164961 5268 Malvidae Singleton cluster - no MSA
124074185 5270 Rosid View MSA
123752953 5271 Pentapetalae View MSA
122774880 5272 Eudicot View MSA
122051549 5273 Angiosperm View MSA
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain