Gene : Thecc1EG022705 T. cacao v1.1
Defline:  (1 of 2) PTHR11615:SF116 - CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED Genomic Order:  929
Name:  ? Thecc1EG022705 Secondary Identifier:  ? PAC:27423391
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022705 0.5kb upstream 0.5kb upstream 1672 true scaffold_5: 6748328-6749999 Theobroma cacao
Thecc1EG022705 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 6748328-6748827 Theobroma cacao
Thecc1EG022705 0.5kb downstream 0.5kb downstream 1672 true scaffold_5: 6748828-6750499 Theobroma cacao
Thecc1EG022705 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 6750000-6750499 Theobroma cacao
Thecc1EG022705 1.0kb upstream 1.0kb upstream 2172 true scaffold_5: 6747828-6749999 Theobroma cacao
Thecc1EG022705 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 6747828-6748827 Theobroma cacao
Thecc1EG022705 1.0kb downstream 1.0kb downstream 2172 true scaffold_5: 6748828-6750999 Theobroma cacao
Thecc1EG022705 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 6750000-6750999 Theobroma cacao
Thecc1EG022705 2.0kb upstream 2.0kb upstream 3172 true scaffold_5: 6746828-6749999 Theobroma cacao
Thecc1EG022705 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 6746828-6748827 Theobroma cacao
Thecc1EG022705 2.0kb downstream 2.0kb downstream 3172 true scaffold_5: 6748828-6751999 Theobroma cacao
Thecc1EG022705 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 6750000-6751999 Theobroma cacao
Thecc1EG022705 5.0kb upstream 5.0kb upstream 6172 true scaffold_5: 6743828-6749999 Theobroma cacao
Thecc1EG022705 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 6743828-6748827 Theobroma cacao
Thecc1EG022705 5.0kb downstream 5.0kb downstream 6172 true scaffold_5: 6748828-6754999 Theobroma cacao
Thecc1EG022705 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 6750000-6754999 Theobroma cacao
Thecc1EG022705 10.0kb upstream 10.0kb upstream 11172 true scaffold_5: 6738828-6749999 Theobroma cacao
Thecc1EG022705 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 6738828-6748827 Theobroma cacao
Thecc1EG022705 10.0kb downstream 10.0kb downstream 11172 true scaffold_5: 6748828-6759999 Theobroma cacao
Thecc1EG022705 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 6750000-6759999 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840781 5264 Brassicales-Malvales View MSA
124340578 5266 SBM View MSA
124251067 5268 Malvidae View MSA
124067511 5270 Rosid View MSA
123750360 5271 Pentapetalae View MSA
122793226 5272 Eudicot View MSA
122046070 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain