Gene : Pavir.5NG062400 P. virgatum v4.1
Defline:  (1 of 26) 2.7.7.49//2.7.7.7//3.1.13.2//3.1.26.13//3.4.23.16 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Exoribonuclease H // Retroviral ribonuclease H // HIV-1 retropepsin / Human immunodeficiency virus type 1 protease Genomic Order:  554
Name:  ? Pavir.5NG062400 Secondary Identifier:  ? PAC:37579471
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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5NG062400 0.5kb upstream 0.5kb upstream 3173 true Chr05N: 7697871-7701043 Panicum virgatum
Pavir.5NG062400 0.5kb upstream 0.5kb upstream 500 false Chr05N: 7700544-7701043 Panicum virgatum
Pavir.5NG062400 0.5kb downstream 0.5kb downstream 3173 true Chr05N: 7697371-7700543 Panicum virgatum
Pavir.5NG062400 0.5kb downstream 0.5kb downstream 500 false Chr05N: 7697371-7697870 Panicum virgatum
Pavir.5NG062400 1.0kb upstream 1.0kb upstream 3673 true Chr05N: 7697871-7701543 Panicum virgatum
Pavir.5NG062400 1.0kb upstream 1.0kb upstream 1000 false Chr05N: 7700544-7701543 Panicum virgatum
Pavir.5NG062400 1.0kb downstream 1.0kb downstream 3673 true Chr05N: 7696871-7700543 Panicum virgatum
Pavir.5NG062400 1.0kb downstream 1.0kb downstream 1000 false Chr05N: 7696871-7697870 Panicum virgatum
Pavir.5NG062400 2.0kb upstream 2.0kb upstream 4673 true Chr05N: 7697871-7702543 Panicum virgatum
Pavir.5NG062400 2.0kb upstream 2.0kb upstream 2000 false Chr05N: 7700544-7702543 Panicum virgatum
Pavir.5NG062400 2.0kb downstream 2.0kb downstream 4673 true Chr05N: 7695871-7700543 Panicum virgatum
Pavir.5NG062400 2.0kb downstream 2.0kb downstream 2000 false Chr05N: 7695871-7697870 Panicum virgatum
Pavir.5NG062400 5.0kb upstream 5.0kb upstream 7673 true Chr05N: 7697871-7705543 Panicum virgatum
Pavir.5NG062400 5.0kb upstream 5.0kb upstream 5000 false Chr05N: 7700544-7705543 Panicum virgatum
Pavir.5NG062400 5.0kb downstream 5.0kb downstream 7673 true Chr05N: 7692871-7700543 Panicum virgatum
Pavir.5NG062400 5.0kb downstream 5.0kb downstream 5000 false Chr05N: 7692871-7697870 Panicum virgatum
Pavir.5NG062400 10.0kb upstream 10.0kb upstream 12673 true Chr05N: 7697871-7710543 Panicum virgatum
Pavir.5NG062400 10.0kb upstream 10.0kb upstream 10000 false Chr05N: 7700544-7710543 Panicum virgatum
Pavir.5NG062400 10.0kb downstream 10.0kb downstream 12673 true Chr05N: 7687871-7700543 Panicum virgatum
Pavir.5NG062400 10.0kb downstream 10.0kb downstream 10000 false Chr05N: 7687871-7697870 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122006147 5273 Angiosperm View MSA
122199631 5267 Panicoideae View MSA
124590470 5269 Grass View MSA
121276265 5274 Embryophyte View MSA
123314552 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain