Gene : Pavir.5NG133100 P. virgatum v4.1
Defline:  (1 of 4) K01869 - leucyl-tRNA synthetase (LARS, leuS) Genomic Order:  1210
Name:  ? Pavir.5NG133100 Secondary Identifier:  ? PAC:37573151
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum TRNA-CHARGING-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5NG133100 0.5kb upstream 0.5kb upstream 8508 true Chr05N: 16260171-16268678 Panicum virgatum
Pavir.5NG133100 0.5kb upstream 0.5kb upstream 500 false Chr05N: 16260171-16260670 Panicum virgatum
Pavir.5NG133100 0.5kb downstream 0.5kb downstream 8508 true Chr05N: 16260671-16269178 Panicum virgatum
Pavir.5NG133100 0.5kb downstream 0.5kb downstream 500 false Chr05N: 16268679-16269178 Panicum virgatum
Pavir.5NG133100 1.0kb upstream 1.0kb upstream 9008 true Chr05N: 16259671-16268678 Panicum virgatum
Pavir.5NG133100 1.0kb upstream 1.0kb upstream 1000 false Chr05N: 16259671-16260670 Panicum virgatum
Pavir.5NG133100 1.0kb downstream 1.0kb downstream 9008 true Chr05N: 16260671-16269678 Panicum virgatum
Pavir.5NG133100 1.0kb downstream 1.0kb downstream 1000 false Chr05N: 16268679-16269678 Panicum virgatum
Pavir.5NG133100 2.0kb upstream 2.0kb upstream 10008 true Chr05N: 16258671-16268678 Panicum virgatum
Pavir.5NG133100 2.0kb upstream 2.0kb upstream 2000 false Chr05N: 16258671-16260670 Panicum virgatum
Pavir.5NG133100 2.0kb downstream 2.0kb downstream 10008 true Chr05N: 16260671-16270678 Panicum virgatum
Pavir.5NG133100 2.0kb downstream 2.0kb downstream 2000 false Chr05N: 16268679-16270678 Panicum virgatum
Pavir.5NG133100 5.0kb upstream 5.0kb upstream 13008 true Chr05N: 16255671-16268678 Panicum virgatum
Pavir.5NG133100 5.0kb upstream 5.0kb upstream 5000 false Chr05N: 16255671-16260670 Panicum virgatum
Pavir.5NG133100 5.0kb downstream 5.0kb downstream 13008 true Chr05N: 16260671-16273678 Panicum virgatum
Pavir.5NG133100 5.0kb downstream 5.0kb downstream 5000 false Chr05N: 16268679-16273678 Panicum virgatum
Pavir.5NG133100 10.0kb upstream 10.0kb upstream 18008 true Chr05N: 16250671-16268678 Panicum virgatum
Pavir.5NG133100 10.0kb upstream 10.0kb upstream 10000 false Chr05N: 16250671-16260670 Panicum virgatum
Pavir.5NG133100 10.0kb downstream 10.0kb downstream 18008 true Chr05N: 16260671-16278678 Panicum virgatum
Pavir.5NG133100 10.0kb downstream 10.0kb downstream 10000 false Chr05N: 16268679-16278678 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041369 5273 Angiosperm View MSA
122190357 5267 Panicoideae View MSA
124571312 5269 Grass View MSA
121347479 5274 Embryophyte View MSA
123424257 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain