Protein : Pavir.5NG133100.1.p P. virgatum v4.1
Secondary Identifier:  PAC:37573151 Organism Name:  Panicum virgatum
Length:  979   Name:  Pavir.5NG133100.1.p
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SummaryProteinsOther
 

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Proteins

8 Protein Domains

DB identifier Type Name
IPR009080 Domain Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
IPR014729 Domain Rossmann-like alpha/beta/alpha sandwich fold
IPR013155 Domain Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
IPR002300 Domain Aminoacyl-tRNA synthetase, class Ia
IPR009008 Domain Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
IPR015413 Family Methionyl/Leucyl tRNA synthetase
IPR002302 Family Leucine-tRNA ligase
IPR025709 Domain Leucyl-tRNA synthetase, editing domain
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Pavir.5NG133100.1_CDS 2940   Chr05N: 16260681-16268514 Panicum virgatum

32 Ontology Annotations

Ontology Term Db Gene/Protein Name
6.1.1.4 ENZYME Pavir.5NG133100.1.p
G3DSA:1.10.730.10 GENE3D Pavir.5NG133100.1.p
G3DSA:3.40.50.620 GENE3D Pavir.5NG133100.1.p
GO:0000166 GO Pavir.5NG133100.1.p
PTHR11946 PANTHER Pavir.5NG133100.1.p
PTHR11946:SF7 PANTHER Pavir.5NG133100.1.p
TRNA-CHARGING-PWY Pathway Pavir.5NG133100.1.p
PF00133 PFAM Pavir.5NG133100.1.p
PF08264 PFAM Pavir.5NG133100.1.p
PF09334 PFAM Pavir.5NG133100.1.p
PF13603 PFAM Pavir.5NG133100.1.p
PR00985 PRINTS Pavir.5NG133100.1.p
SSF47323 SSF Pavir.5NG133100.1.p
SSF50677 SSF Pavir.5NG133100.1.p
SSF52374 SSF Pavir.5NG133100.1.p
TIGR00396 TIGRFAMs Pavir.5NG133100.1.p
GO:0002161 GO Pavir.5NG133100.1.p
GO:0004812 GO Pavir.5NG133100.1.p
GO:0004823 GO Pavir.5NG133100.1.p
GO:0005524 GO Pavir.5NG133100.1.p
GO:0006418 GO Pavir.5NG133100.1.p
GO:0006429 GO Pavir.5NG133100.1.p
IPR002300 InterPro Pavir.5NG133100.1.p
IPR002302 InterPro Pavir.5NG133100.1.p
IPR009008 InterPro Pavir.5NG133100.1.p
IPR009080 InterPro Pavir.5NG133100.1.p
IPR013155 InterPro Pavir.5NG133100.1.p
IPR014729 InterPro Pavir.5NG133100.1.p
IPR015413 InterPro Pavir.5NG133100.1.p
IPR025709 InterPro Pavir.5NG133100.1.p

1 Pathway Components

Type Key Level Step
      94

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum TRNA-CHARGING-PWY Panicum virgatum pathologic