Gene : Pavir.5NG173000 P. virgatum v4.1
Defline:  (1 of 2) PF00994//PF01507 - Probable molybdopterin binding domain (MoCF_biosynth) // Phosphoadenosine phosphosulfate reductase family (PAPS_reduct) Genomic Order:  1568
Name:  ? Pavir.5NG173000 Secondary Identifier:  ? PAC:37572965
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum RIBOSYN2-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5NG173000 0.5kb upstream 0.5kb upstream 10541 true Chr05N: 21707881-21718421 Panicum virgatum
Pavir.5NG173000 0.5kb upstream 0.5kb upstream 500 false Chr05N: 21717922-21718421 Panicum virgatum
Pavir.5NG173000 0.5kb downstream 0.5kb downstream 10541 true Chr05N: 21707381-21717921 Panicum virgatum
Pavir.5NG173000 0.5kb downstream 0.5kb downstream 500 false Chr05N: 21707381-21707880 Panicum virgatum
Pavir.5NG173000 1.0kb upstream 1.0kb upstream 11041 true Chr05N: 21707881-21718921 Panicum virgatum
Pavir.5NG173000 1.0kb upstream 1.0kb upstream 1000 false Chr05N: 21717922-21718921 Panicum virgatum
Pavir.5NG173000 1.0kb downstream 1.0kb downstream 11041 true Chr05N: 21706881-21717921 Panicum virgatum
Pavir.5NG173000 1.0kb downstream 1.0kb downstream 1000 false Chr05N: 21706881-21707880 Panicum virgatum
Pavir.5NG173000 2.0kb upstream 2.0kb upstream 12041 true Chr05N: 21707881-21719921 Panicum virgatum
Pavir.5NG173000 2.0kb upstream 2.0kb upstream 2000 false Chr05N: 21717922-21719921 Panicum virgatum
Pavir.5NG173000 2.0kb downstream 2.0kb downstream 12041 true Chr05N: 21705881-21717921 Panicum virgatum
Pavir.5NG173000 2.0kb downstream 2.0kb downstream 2000 false Chr05N: 21705881-21707880 Panicum virgatum
Pavir.5NG173000 5.0kb upstream 5.0kb upstream 15041 true Chr05N: 21707881-21722921 Panicum virgatum
Pavir.5NG173000 5.0kb upstream 5.0kb upstream 5000 false Chr05N: 21717922-21722921 Panicum virgatum
Pavir.5NG173000 5.0kb downstream 5.0kb downstream 15041 true Chr05N: 21702881-21717921 Panicum virgatum
Pavir.5NG173000 5.0kb downstream 5.0kb downstream 5000 false Chr05N: 21702881-21707880 Panicum virgatum
Pavir.5NG173000 10.0kb upstream 10.0kb upstream 20041 true Chr05N: 21707881-21727921 Panicum virgatum
Pavir.5NG173000 10.0kb upstream 10.0kb upstream 10000 false Chr05N: 21717922-21727921 Panicum virgatum
Pavir.5NG173000 10.0kb downstream 10.0kb downstream 20041 true Chr05N: 21697881-21717921 Panicum virgatum
Pavir.5NG173000 10.0kb downstream 10.0kb downstream 10000 false Chr05N: 21697881-21707880 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184115 5267 Panicoideae View MSA
124580685 5269 Grass View MSA
122049798 5273 Angiosperm View MSA
121344639 5274 Embryophyte View MSA
123427825 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain