Gene : Thecc1EG022980 T. cacao v1.1

Defline:  (1 of 1) PTHR10060//PTHR10060:SF15 - TATD FAMILY DEOXYRIBONUCLEASE // DEOXYRIBONUCLEASE TATDN1-RELATED Genomic Order:  1046
Name:  ? Thecc1EG022980 Secondary Identifier:  ? PAC:27422642

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022980 0.5kb upstream 0.5kb upstream 5662 true scaffold_5: 9430978-9436639 Theobroma cacao
Thecc1EG022980 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9430978-9431477 Theobroma cacao
Thecc1EG022980 0.5kb downstream 0.5kb downstream 5662 true scaffold_5: 9431478-9437139 Theobroma cacao
Thecc1EG022980 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9436640-9437139 Theobroma cacao
Thecc1EG022980 1.0kb upstream 1.0kb upstream 6162 true scaffold_5: 9430478-9436639 Theobroma cacao
Thecc1EG022980 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9430478-9431477 Theobroma cacao
Thecc1EG022980 1.0kb downstream 1.0kb downstream 6162 true scaffold_5: 9431478-9437639 Theobroma cacao
Thecc1EG022980 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9436640-9437639 Theobroma cacao
Thecc1EG022980 2.0kb upstream 2.0kb upstream 7162 true scaffold_5: 9429478-9436639 Theobroma cacao
Thecc1EG022980 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9429478-9431477 Theobroma cacao
Thecc1EG022980 2.0kb downstream 2.0kb downstream 7162 true scaffold_5: 9431478-9438639 Theobroma cacao
Thecc1EG022980 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9436640-9438639 Theobroma cacao
Thecc1EG022980 5.0kb upstream 5.0kb upstream 10162 true scaffold_5: 9426478-9436639 Theobroma cacao
Thecc1EG022980 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9426478-9431477 Theobroma cacao
Thecc1EG022980 5.0kb downstream 5.0kb downstream 10162 true scaffold_5: 9431478-9441639 Theobroma cacao
Thecc1EG022980 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9436640-9441639 Theobroma cacao
Thecc1EG022980 10.0kb upstream 10.0kb upstream 15162 true scaffold_5: 9421478-9436639 Theobroma cacao
Thecc1EG022980 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9421478-9431477 Theobroma cacao
Thecc1EG022980 10.0kb downstream 10.0kb downstream 15162 true scaffold_5: 9431478-9446639 Theobroma cacao
Thecc1EG022980 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9436640-9446639 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834743 5264 Brassicales-Malvales View MSA
124342043 5266 SBM View MSA
124238053 5268 Malvidae View MSA
124066982 5270 Rosid View MSA
123737057 5271 Pentapetalae View MSA
122786612 5272 Eudicot View MSA
122047373 5273 Angiosperm View MSA
121345564 5274 Embryophyte View MSA
123428718 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain