Gene : Thecc1EG022960 T. cacao v1.1
Defline:  (1 of 2) PTHR22849//PTHR22849:SF24 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1035
Name:  ? Thecc1EG022960 Secondary Identifier:  ? PAC:27424704
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7511 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG022960 0.5kb upstream 0.5kb upstream 15858 true scaffold_5: 9239467-9255324 Theobroma cacao
Thecc1EG022960 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9239467-9239966 Theobroma cacao
Thecc1EG022960 0.5kb downstream 0.5kb downstream 15858 true scaffold_5: 9239967-9255824 Theobroma cacao
Thecc1EG022960 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9255325-9255824 Theobroma cacao
Thecc1EG022960 1.0kb upstream 1.0kb upstream 16358 true scaffold_5: 9238967-9255324 Theobroma cacao
Thecc1EG022960 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9238967-9239966 Theobroma cacao
Thecc1EG022960 1.0kb downstream 1.0kb downstream 16358 true scaffold_5: 9239967-9256324 Theobroma cacao
Thecc1EG022960 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9255325-9256324 Theobroma cacao
Thecc1EG022960 2.0kb upstream 2.0kb upstream 17358 true scaffold_5: 9237967-9255324 Theobroma cacao
Thecc1EG022960 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9237967-9239966 Theobroma cacao
Thecc1EG022960 2.0kb downstream 2.0kb downstream 17358 true scaffold_5: 9239967-9257324 Theobroma cacao
Thecc1EG022960 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9255325-9257324 Theobroma cacao
Thecc1EG022960 5.0kb upstream 5.0kb upstream 20358 true scaffold_5: 9234967-9255324 Theobroma cacao
Thecc1EG022960 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9234967-9239966 Theobroma cacao
Thecc1EG022960 5.0kb downstream 5.0kb downstream 20358 true scaffold_5: 9239967-9260324 Theobroma cacao
Thecc1EG022960 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9255325-9260324 Theobroma cacao
Thecc1EG022960 10.0kb upstream 10.0kb upstream 25358 true scaffold_5: 9229967-9255324 Theobroma cacao
Thecc1EG022960 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9229967-9239966 Theobroma cacao
Thecc1EG022960 10.0kb downstream 10.0kb downstream 25358 true scaffold_5: 9239967-9265324 Theobroma cacao
Thecc1EG022960 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9255325-9265324 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839654 5264 Brassicales-Malvales View MSA
124345948 5266 SBM View MSA
124251997 5268 Malvidae View MSA
124070283 5270 Rosid View MSA
123752134 5271 Pentapetalae View MSA
122795209 5272 Eudicot View MSA
122048631 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain