Gene : Thecc1EG024169 T. cacao v1.1
Defline:  (1 of 1) PTHR22778//PTHR22778:SF22 - OVARIAN CANCER GENE-2 PROTEIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1323
Name:  ? Thecc1EG024169 Secondary Identifier:  ? PAC:27424368
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-3841 Theobroma cacao pathologic  
Tcacao PWY-6612 Theobroma cacao pathologic  
Tcacao PWY-6614 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024169 0.5kb upstream 0.5kb upstream 3607 true scaffold_5: 22806945-22810551 Theobroma cacao
Thecc1EG024169 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 22810052-22810551 Theobroma cacao
Thecc1EG024169 0.5kb downstream 0.5kb downstream 3607 true scaffold_5: 22806445-22810051 Theobroma cacao
Thecc1EG024169 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 22806445-22806944 Theobroma cacao
Thecc1EG024169 1.0kb upstream 1.0kb upstream 4107 true scaffold_5: 22806945-22811051 Theobroma cacao
Thecc1EG024169 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 22810052-22811051 Theobroma cacao
Thecc1EG024169 1.0kb downstream 1.0kb downstream 4107 true scaffold_5: 22805945-22810051 Theobroma cacao
Thecc1EG024169 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 22805945-22806944 Theobroma cacao
Thecc1EG024169 2.0kb upstream 2.0kb upstream 5107 true scaffold_5: 22806945-22812051 Theobroma cacao
Thecc1EG024169 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 22810052-22812051 Theobroma cacao
Thecc1EG024169 2.0kb downstream 2.0kb downstream 5107 true scaffold_5: 22804945-22810051 Theobroma cacao
Thecc1EG024169 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 22804945-22806944 Theobroma cacao
Thecc1EG024169 5.0kb upstream 5.0kb upstream 8107 true scaffold_5: 22806945-22815051 Theobroma cacao
Thecc1EG024169 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 22810052-22815051 Theobroma cacao
Thecc1EG024169 5.0kb downstream 5.0kb downstream 8107 true scaffold_5: 22801945-22810051 Theobroma cacao
Thecc1EG024169 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 22801945-22806944 Theobroma cacao
Thecc1EG024169 10.0kb upstream 10.0kb upstream 13107 true scaffold_5: 22806945-22820051 Theobroma cacao
Thecc1EG024169 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 22810052-22820051 Theobroma cacao
Thecc1EG024169 10.0kb downstream 10.0kb downstream 13107 true scaffold_5: 22796945-22810051 Theobroma cacao
Thecc1EG024169 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 22796945-22806944 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824386 5264 Brassicales-Malvales View MSA
124348938 5266 SBM View MSA
124246208 5268 Malvidae View MSA
124070831 5270 Rosid View MSA
123747932 5271 Pentapetalae View MSA
122794678 5272 Eudicot View MSA
122048467 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121348869 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain