Gene : Pavir.J231000 P. virgatum v4.1
Defline:  (1 of 3) PTHR12869 - SMALL SEVEN TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN Genomic Order:  2
Name:  ? Pavir.J231000 Secondary Identifier:  ? PAC:37563458
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.J231000 0.5kb upstream 0.5kb upstream 5034 true scaffold_2002: 12511-17544 Panicum virgatum
Pavir.J231000 0.5kb upstream 0.5kb upstream 500 false scaffold_2002: 17045-17544 Panicum virgatum
Pavir.J231000 0.5kb downstream 0.5kb downstream 5034 true scaffold_2002: 12011-17044 Panicum virgatum
Pavir.J231000 0.5kb downstream 0.5kb downstream 500 false scaffold_2002: 12011-12510 Panicum virgatum
Pavir.J231000 1.0kb upstream 1.0kb upstream 5534 true scaffold_2002: 12511-18044 Panicum virgatum
Pavir.J231000 1.0kb upstream 1.0kb upstream 1000 false scaffold_2002: 17045-18044 Panicum virgatum
Pavir.J231000 1.0kb downstream 1.0kb downstream 5534 true scaffold_2002: 11511-17044 Panicum virgatum
Pavir.J231000 1.0kb downstream 1.0kb downstream 1000 false scaffold_2002: 11511-12510 Panicum virgatum
Pavir.J231000 2.0kb upstream 2.0kb upstream 6534 true scaffold_2002: 12511-19044 Panicum virgatum
Pavir.J231000 2.0kb upstream 2.0kb upstream 2000 false scaffold_2002: 17045-19044 Panicum virgatum
Pavir.J231000 2.0kb downstream 2.0kb downstream 6534 true scaffold_2002: 10511-17044 Panicum virgatum
Pavir.J231000 2.0kb downstream 2.0kb downstream 2000 false scaffold_2002: 10511-12510 Panicum virgatum
Pavir.J231000 5.0kb upstream 5.0kb upstream 7368 true scaffold_2002: 12511-19878 Panicum virgatum
Pavir.J231000 5.0kb upstream 5.0kb upstream 2834 false scaffold_2002: 17045-19878 Panicum virgatum
Pavir.J231000 5.0kb downstream 5.0kb downstream 9534 true scaffold_2002: 7511-17044 Panicum virgatum
Pavir.J231000 5.0kb downstream 5.0kb downstream 5000 false scaffold_2002: 7511-12510 Panicum virgatum
Pavir.J231000 10.0kb upstream 10.0kb upstream 7368 true scaffold_2002: 12511-19878 Panicum virgatum
Pavir.J231000 10.0kb upstream 10.0kb upstream 2834 false scaffold_2002: 17045-19878 Panicum virgatum
Pavir.J231000 10.0kb downstream 10.0kb downstream 14534 true scaffold_2002: 2511-17044 Panicum virgatum
Pavir.J231000 10.0kb downstream 10.0kb downstream 10000 false scaffold_2002: 2511-12510 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184243 5267 Panicoideae View MSA
124583772 5269 Grass View MSA
122046816 5273 Angiosperm View MSA
121343820 5274 Embryophyte View MSA
123379923 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain