Gene : Pavir.6NG013200 P. virgatum v4.1
Defline:  (1 of 31) PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  115
Name:  ? Pavir.6NG013200 Secondary Identifier:  ? PAC:37645050
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.6NG013200 0.5kb upstream 0.5kb upstream 5372 true Chr06N: 1621788-1627159 Panicum virgatum
Pavir.6NG013200 0.5kb upstream 0.5kb upstream 500 false Chr06N: 1626660-1627159 Panicum virgatum
Pavir.6NG013200 0.5kb downstream 0.5kb downstream 5372 true Chr06N: 1621288-1626659 Panicum virgatum
Pavir.6NG013200 0.5kb downstream 0.5kb downstream 500 false Chr06N: 1621288-1621787 Panicum virgatum
Pavir.6NG013200 1.0kb upstream 1.0kb upstream 5872 true Chr06N: 1621788-1627659 Panicum virgatum
Pavir.6NG013200 1.0kb upstream 1.0kb upstream 1000 false Chr06N: 1626660-1627659 Panicum virgatum
Pavir.6NG013200 1.0kb downstream 1.0kb downstream 5872 true Chr06N: 1620788-1626659 Panicum virgatum
Pavir.6NG013200 1.0kb downstream 1.0kb downstream 1000 false Chr06N: 1620788-1621787 Panicum virgatum
Pavir.6NG013200 2.0kb upstream 2.0kb upstream 6872 true Chr06N: 1621788-1628659 Panicum virgatum
Pavir.6NG013200 2.0kb upstream 2.0kb upstream 2000 false Chr06N: 1626660-1628659 Panicum virgatum
Pavir.6NG013200 2.0kb downstream 2.0kb downstream 6872 true Chr06N: 1619788-1626659 Panicum virgatum
Pavir.6NG013200 2.0kb downstream 2.0kb downstream 2000 false Chr06N: 1619788-1621787 Panicum virgatum
Pavir.6NG013200 5.0kb upstream 5.0kb upstream 9872 true Chr06N: 1621788-1631659 Panicum virgatum
Pavir.6NG013200 5.0kb upstream 5.0kb upstream 5000 false Chr06N: 1626660-1631659 Panicum virgatum
Pavir.6NG013200 5.0kb downstream 5.0kb downstream 9872 true Chr06N: 1616788-1626659 Panicum virgatum
Pavir.6NG013200 5.0kb downstream 5.0kb downstream 5000 false Chr06N: 1616788-1621787 Panicum virgatum
Pavir.6NG013200 10.0kb upstream 10.0kb upstream 14872 true Chr06N: 1621788-1636659 Panicum virgatum
Pavir.6NG013200 10.0kb upstream 10.0kb upstream 10000 false Chr06N: 1626660-1636659 Panicum virgatum
Pavir.6NG013200 10.0kb downstream 10.0kb downstream 14872 true Chr06N: 1611788-1626659 Panicum virgatum
Pavir.6NG013200 10.0kb downstream 10.0kb downstream 10000 false Chr06N: 1611788-1621787 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196602 5267 Panicoideae View MSA
124585163 5269 Grass View MSA
122048876 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain