Gene : Pavir.6NG027900 P. virgatum v4.1
Defline:  (1 of 2) 6.2.1.26 - o-succinylbenzoate--CoA ligase / OSB-CoA synthetase Genomic Order:  250
Name:  ? Pavir.6NG027900 Secondary Identifier:  ? PAC:37646380
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-5837 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.6NG027900 0.5kb upstream 0.5kb upstream 4206 true Chr06N: 2978207-2982412 Panicum virgatum
Pavir.6NG027900 0.5kb upstream 0.5kb upstream 500 false Chr06N: 2981913-2982412 Panicum virgatum
Pavir.6NG027900 0.5kb downstream 0.5kb downstream 4206 true Chr06N: 2977707-2981912 Panicum virgatum
Pavir.6NG027900 0.5kb downstream 0.5kb downstream 500 false Chr06N: 2977707-2978206 Panicum virgatum
Pavir.6NG027900 1.0kb upstream 1.0kb upstream 4706 true Chr06N: 2978207-2982912 Panicum virgatum
Pavir.6NG027900 1.0kb upstream 1.0kb upstream 1000 false Chr06N: 2981913-2982912 Panicum virgatum
Pavir.6NG027900 1.0kb downstream 1.0kb downstream 4706 true Chr06N: 2977207-2981912 Panicum virgatum
Pavir.6NG027900 1.0kb downstream 1.0kb downstream 1000 false Chr06N: 2977207-2978206 Panicum virgatum
Pavir.6NG027900 2.0kb upstream 2.0kb upstream 5706 true Chr06N: 2978207-2983912 Panicum virgatum
Pavir.6NG027900 2.0kb upstream 2.0kb upstream 2000 false Chr06N: 2981913-2983912 Panicum virgatum
Pavir.6NG027900 2.0kb downstream 2.0kb downstream 5706 true Chr06N: 2976207-2981912 Panicum virgatum
Pavir.6NG027900 2.0kb downstream 2.0kb downstream 2000 false Chr06N: 2976207-2978206 Panicum virgatum
Pavir.6NG027900 5.0kb upstream 5.0kb upstream 8706 true Chr06N: 2978207-2986912 Panicum virgatum
Pavir.6NG027900 5.0kb upstream 5.0kb upstream 5000 false Chr06N: 2981913-2986912 Panicum virgatum
Pavir.6NG027900 5.0kb downstream 5.0kb downstream 8706 true Chr06N: 2973207-2981912 Panicum virgatum
Pavir.6NG027900 5.0kb downstream 5.0kb downstream 5000 false Chr06N: 2973207-2978206 Panicum virgatum
Pavir.6NG027900 10.0kb upstream 10.0kb upstream 13706 true Chr06N: 2978207-2991912 Panicum virgatum
Pavir.6NG027900 10.0kb upstream 10.0kb upstream 10000 false Chr06N: 2981913-2991912 Panicum virgatum
Pavir.6NG027900 10.0kb downstream 10.0kb downstream 13706 true Chr06N: 2968207-2981912 Panicum virgatum
Pavir.6NG027900 10.0kb downstream 10.0kb downstream 10000 false Chr06N: 2968207-2978206 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189110 5267 Panicoideae View MSA
124581265 5269 Grass View MSA
122042580 5273 Angiosperm View MSA
121346156 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain