Gene : Thecc1EG024335 T. cacao v1.1
Defline:  (1 of 3) 2.1.1.257 - tRNA (pseudouridine(54)-N(1))-methyltransferase / M(1)-Psi methyltransferase Genomic Order:  1395
Name:  ? Thecc1EG024335 Secondary Identifier:  ? PAC:27425429
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024335 0.5kb upstream 0.5kb upstream 83780 true scaffold_5: 24661170-24744949 Theobroma cacao
Thecc1EG024335 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 24661170-24661669 Theobroma cacao
Thecc1EG024335 0.5kb downstream 0.5kb downstream 83780 true scaffold_5: 24661670-24745449 Theobroma cacao
Thecc1EG024335 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 24744950-24745449 Theobroma cacao
Thecc1EG024335 1.0kb upstream 1.0kb upstream 84280 true scaffold_5: 24660670-24744949 Theobroma cacao
Thecc1EG024335 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 24660670-24661669 Theobroma cacao
Thecc1EG024335 1.0kb downstream 1.0kb downstream 84280 true scaffold_5: 24661670-24745949 Theobroma cacao
Thecc1EG024335 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 24744950-24745949 Theobroma cacao
Thecc1EG024335 2.0kb upstream 2.0kb upstream 85280 true scaffold_5: 24659670-24744949 Theobroma cacao
Thecc1EG024335 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 24659670-24661669 Theobroma cacao
Thecc1EG024335 2.0kb downstream 2.0kb downstream 85280 true scaffold_5: 24661670-24746949 Theobroma cacao
Thecc1EG024335 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 24744950-24746949 Theobroma cacao
Thecc1EG024335 5.0kb upstream 5.0kb upstream 88280 true scaffold_5: 24656670-24744949 Theobroma cacao
Thecc1EG024335 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 24656670-24661669 Theobroma cacao
Thecc1EG024335 5.0kb downstream 5.0kb downstream 88280 true scaffold_5: 24661670-24749949 Theobroma cacao
Thecc1EG024335 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 24744950-24749949 Theobroma cacao
Thecc1EG024335 10.0kb upstream 10.0kb upstream 93280 true scaffold_5: 24651670-24744949 Theobroma cacao
Thecc1EG024335 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 24651670-24661669 Theobroma cacao
Thecc1EG024335 10.0kb downstream 10.0kb downstream 93280 true scaffold_5: 24661670-24754949 Theobroma cacao
Thecc1EG024335 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 24744950-24754949 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834900 5264 Brassicales-Malvales View MSA
124341453 5266 SBM View MSA
124247817 5268 Malvidae View MSA
124066897 5270 Rosid View MSA
123749345 5271 Pentapetalae View MSA
122789424 5272 Eudicot View MSA
122046063 5273 Angiosperm View MSA
121345370 5274 Embryophyte View MSA
123425050 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain