Gene : Pavir.3KG325100 P. virgatum v4.1
Defline:  (1 of 4) PTHR10836//PTHR10836:SF58 - GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE // SUBFAMILY NOT NAMED Genomic Order:  2564
Name:  ? Pavir.3KG325100 Secondary Identifier:  ? PAC:37592821
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum ANAEROFRUCAT-PWY Panicum virgatum pathologic  
Pvirgatum ANAGLYCOLYSIS-PWY Panicum virgatum pathologic  
Pvirgatum GLUCONEO-PWY Panicum virgatum pathologic  
Pvirgatum PWY-1042 Panicum virgatum pathologic  
Pvirgatum PWY-5464 Panicum virgatum pathologic  
Pvirgatum SUCSYN-PWY Panicum virgatum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.3KG325100 0.5kb upstream 0.5kb upstream 4813 true Chr03K: 26227267-26232079 Panicum virgatum
Pavir.3KG325100 0.5kb upstream 0.5kb upstream 500 false Chr03K: 26227267-26227766 Panicum virgatum
Pavir.3KG325100 0.5kb downstream 0.5kb downstream 4813 true Chr03K: 26227767-26232579 Panicum virgatum
Pavir.3KG325100 0.5kb downstream 0.5kb downstream 500 false Chr03K: 26232080-26232579 Panicum virgatum
Pavir.3KG325100 1.0kb upstream 1.0kb upstream 5313 true Chr03K: 26226767-26232079 Panicum virgatum
Pavir.3KG325100 1.0kb upstream 1.0kb upstream 1000 false Chr03K: 26226767-26227766 Panicum virgatum
Pavir.3KG325100 1.0kb downstream 1.0kb downstream 5313 true Chr03K: 26227767-26233079 Panicum virgatum
Pavir.3KG325100 1.0kb downstream 1.0kb downstream 1000 false Chr03K: 26232080-26233079 Panicum virgatum
Pavir.3KG325100 2.0kb upstream 2.0kb upstream 6313 true Chr03K: 26225767-26232079 Panicum virgatum
Pavir.3KG325100 2.0kb upstream 2.0kb upstream 2000 false Chr03K: 26225767-26227766 Panicum virgatum
Pavir.3KG325100 2.0kb downstream 2.0kb downstream 6313 true Chr03K: 26227767-26234079 Panicum virgatum
Pavir.3KG325100 2.0kb downstream 2.0kb downstream 2000 false Chr03K: 26232080-26234079 Panicum virgatum
Pavir.3KG325100 5.0kb upstream 5.0kb upstream 9313 true Chr03K: 26222767-26232079 Panicum virgatum
Pavir.3KG325100 5.0kb upstream 5.0kb upstream 5000 false Chr03K: 26222767-26227766 Panicum virgatum
Pavir.3KG325100 5.0kb downstream 5.0kb downstream 9313 true Chr03K: 26227767-26237079 Panicum virgatum
Pavir.3KG325100 5.0kb downstream 5.0kb downstream 5000 false Chr03K: 26232080-26237079 Panicum virgatum
Pavir.3KG325100 10.0kb upstream 10.0kb upstream 14313 true Chr03K: 26217767-26232079 Panicum virgatum
Pavir.3KG325100 10.0kb upstream 10.0kb upstream 10000 false Chr03K: 26217767-26227766 Panicum virgatum
Pavir.3KG325100 10.0kb downstream 10.0kb downstream 14313 true Chr03K: 26227767-26242079 Panicum virgatum
Pavir.3KG325100 10.0kb downstream 10.0kb downstream 10000 false Chr03K: 26232080-26242079 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195561 5267 Panicoideae View MSA
124589376 5269 Grass View MSA
122051601 5273 Angiosperm View MSA
121347451 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain