Gene : Thecc1EG024615 T. cacao v1.1
Defline:  (1 of 2) PTHR11728:SF17 - 6-PHOSPHOGLUCONATE DEHYDROGENASE-LIKE PROTEIN Genomic Order:  1538
Name:  ? Thecc1EG024615 Secondary Identifier:  ? PAC:27425132
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6118 Theobroma cacao pathologic  
Tcacao PWY-7411 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024615 0.5kb upstream 0.5kb upstream 6185 true scaffold_5: 27158332-27164516 Theobroma cacao
Thecc1EG024615 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 27164017-27164516 Theobroma cacao
Thecc1EG024615 0.5kb downstream 0.5kb downstream 6185 true scaffold_5: 27157832-27164016 Theobroma cacao
Thecc1EG024615 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 27157832-27158331 Theobroma cacao
Thecc1EG024615 1.0kb upstream 1.0kb upstream 6685 true scaffold_5: 27158332-27165016 Theobroma cacao
Thecc1EG024615 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 27164017-27165016 Theobroma cacao
Thecc1EG024615 1.0kb downstream 1.0kb downstream 6685 true scaffold_5: 27157332-27164016 Theobroma cacao
Thecc1EG024615 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 27157332-27158331 Theobroma cacao
Thecc1EG024615 2.0kb upstream 2.0kb upstream 7685 true scaffold_5: 27158332-27166016 Theobroma cacao
Thecc1EG024615 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 27164017-27166016 Theobroma cacao
Thecc1EG024615 2.0kb downstream 2.0kb downstream 7685 true scaffold_5: 27156332-27164016 Theobroma cacao
Thecc1EG024615 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 27156332-27158331 Theobroma cacao
Thecc1EG024615 5.0kb upstream 5.0kb upstream 10685 true scaffold_5: 27158332-27169016 Theobroma cacao
Thecc1EG024615 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 27164017-27169016 Theobroma cacao
Thecc1EG024615 5.0kb downstream 5.0kb downstream 10685 true scaffold_5: 27153332-27164016 Theobroma cacao
Thecc1EG024615 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 27153332-27158331 Theobroma cacao
Thecc1EG024615 10.0kb upstream 10.0kb upstream 15685 true scaffold_5: 27158332-27174016 Theobroma cacao
Thecc1EG024615 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 27164017-27174016 Theobroma cacao
Thecc1EG024615 10.0kb downstream 10.0kb downstream 15685 true scaffold_5: 27148332-27164016 Theobroma cacao
Thecc1EG024615 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 27148332-27158331 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840011 5264 Brassicales-Malvales View MSA
124343706 5266 SBM View MSA
124251382 5268 Malvidae View MSA
124069658 5270 Rosid View MSA
123738520 5271 Pentapetalae View MSA
122790520 5272 Eudicot View MSA
122046820 5273 Angiosperm View MSA
121349677 5274 Embryophyte View MSA
123381397 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain