Gene : Thecc1EG024602 T. cacao v1.1
Defline:  (1 of 1) PTHR24093:SF296 - CALCIUM-TRANSPORTING ATPASE 4, PLASMA MEMBRANE-TYPE-RELATED Genomic Order:  1533
Name:  ? Thecc1EG024602 Secondary Identifier:  ? PAC:27425327
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024602 0.5kb upstream 0.5kb upstream 8899 true scaffold_5: 27098511-27107409 Theobroma cacao
Thecc1EG024602 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 27098511-27099010 Theobroma cacao
Thecc1EG024602 0.5kb downstream 0.5kb downstream 8899 true scaffold_5: 27099011-27107909 Theobroma cacao
Thecc1EG024602 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 27107410-27107909 Theobroma cacao
Thecc1EG024602 1.0kb upstream 1.0kb upstream 9399 true scaffold_5: 27098011-27107409 Theobroma cacao
Thecc1EG024602 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 27098011-27099010 Theobroma cacao
Thecc1EG024602 1.0kb downstream 1.0kb downstream 9399 true scaffold_5: 27099011-27108409 Theobroma cacao
Thecc1EG024602 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 27107410-27108409 Theobroma cacao
Thecc1EG024602 2.0kb upstream 2.0kb upstream 10399 true scaffold_5: 27097011-27107409 Theobroma cacao
Thecc1EG024602 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 27097011-27099010 Theobroma cacao
Thecc1EG024602 2.0kb downstream 2.0kb downstream 10399 true scaffold_5: 27099011-27109409 Theobroma cacao
Thecc1EG024602 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 27107410-27109409 Theobroma cacao
Thecc1EG024602 5.0kb upstream 5.0kb upstream 13399 true scaffold_5: 27094011-27107409 Theobroma cacao
Thecc1EG024602 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 27094011-27099010 Theobroma cacao
Thecc1EG024602 5.0kb downstream 5.0kb downstream 13399 true scaffold_5: 27099011-27112409 Theobroma cacao
Thecc1EG024602 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 27107410-27112409 Theobroma cacao
Thecc1EG024602 10.0kb upstream 10.0kb upstream 18399 true scaffold_5: 27089011-27107409 Theobroma cacao
Thecc1EG024602 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 27089011-27099010 Theobroma cacao
Thecc1EG024602 10.0kb downstream 10.0kb downstream 18399 true scaffold_5: 27099011-27117409 Theobroma cacao
Thecc1EG024602 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 27107410-27117409 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835352 5264 Brassicales-Malvales View MSA
124349440 5266 SBM View MSA
124244761 5268 Malvidae View MSA
124070043 5270 Rosid View MSA
123738336 5271 Pentapetalae View MSA
122786540 5272 Eudicot View MSA
122043191 5273 Angiosperm View MSA
121349207 5274 Embryophyte View MSA
123428805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain