Gene : Pavir.3KG571100 P. virgatum v4.1
Defline:  (1 of 3) PTHR22953//PTHR22953:SF29 - ACID PHOSPHATASE RELATED // SUBFAMILY NOT NAMED Genomic Order:  5213
Name:  ? Pavir.3KG571100 Secondary Identifier:  ? PAC:37592505
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-5083 Panicum virgatum pathologic  
Pvirgatum PWY-6348 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.3KG571100 0.5kb upstream 0.5kb upstream 4066 true Chr03K: 72009001-72013066 Panicum virgatum
Pavir.3KG571100 0.5kb upstream 0.5kb upstream 500 false Chr03K: 72012567-72013066 Panicum virgatum
Pavir.3KG571100 0.5kb downstream 0.5kb downstream 4066 true Chr03K: 72008501-72012566 Panicum virgatum
Pavir.3KG571100 0.5kb downstream 0.5kb downstream 500 false Chr03K: 72008501-72009000 Panicum virgatum
Pavir.3KG571100 1.0kb upstream 1.0kb upstream 4566 true Chr03K: 72009001-72013566 Panicum virgatum
Pavir.3KG571100 1.0kb upstream 1.0kb upstream 1000 false Chr03K: 72012567-72013566 Panicum virgatum
Pavir.3KG571100 1.0kb downstream 1.0kb downstream 4566 true Chr03K: 72008001-72012566 Panicum virgatum
Pavir.3KG571100 1.0kb downstream 1.0kb downstream 1000 false Chr03K: 72008001-72009000 Panicum virgatum
Pavir.3KG571100 2.0kb upstream 2.0kb upstream 5566 true Chr03K: 72009001-72014566 Panicum virgatum
Pavir.3KG571100 2.0kb upstream 2.0kb upstream 2000 false Chr03K: 72012567-72014566 Panicum virgatum
Pavir.3KG571100 2.0kb downstream 2.0kb downstream 5566 true Chr03K: 72007001-72012566 Panicum virgatum
Pavir.3KG571100 2.0kb downstream 2.0kb downstream 2000 false Chr03K: 72007001-72009000 Panicum virgatum
Pavir.3KG571100 5.0kb upstream 5.0kb upstream 8566 true Chr03K: 72009001-72017566 Panicum virgatum
Pavir.3KG571100 5.0kb upstream 5.0kb upstream 5000 false Chr03K: 72012567-72017566 Panicum virgatum
Pavir.3KG571100 5.0kb downstream 5.0kb downstream 8566 true Chr03K: 72004001-72012566 Panicum virgatum
Pavir.3KG571100 5.0kb downstream 5.0kb downstream 5000 false Chr03K: 72004001-72009000 Panicum virgatum
Pavir.3KG571100 10.0kb upstream 10.0kb upstream 13566 true Chr03K: 72009001-72022566 Panicum virgatum
Pavir.3KG571100 10.0kb upstream 10.0kb upstream 10000 false Chr03K: 72012567-72022566 Panicum virgatum
Pavir.3KG571100 10.0kb downstream 10.0kb downstream 13566 true Chr03K: 71999001-72012566 Panicum virgatum
Pavir.3KG571100 10.0kb downstream 10.0kb downstream 10000 false Chr03K: 71999001-72009000 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121993093 5273 Angiosperm View MSA
122184581 5267 Panicoideae View MSA
124574871 5269 Grass View MSA
121351600 5274 Embryophyte View MSA
123426131 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain