Gene : Pavir.3KG535800 P. virgatum v4.1
Defline:  (1 of 1) KOG0327//KOG0328//KOG0340 - Translation initiation factor 4F, helicase subunit (eIF-4A) and related helicases // Predicted ATP-dependent RNA helicase FAL1, involved in rRNA maturation, DEAD-box superfamily // ATP-dependent RNA helicase Genomic Order:  4890
Name:  ? Pavir.3KG535800 Secondary Identifier:  ? PAC:37595552
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.3KG535800 0.5kb upstream 0.5kb upstream 4420 true Chr03K: 68905058-68909477 Panicum virgatum
Pavir.3KG535800 0.5kb upstream 0.5kb upstream 500 false Chr03K: 68908978-68909477 Panicum virgatum
Pavir.3KG535800 0.5kb downstream 0.5kb downstream 4420 true Chr03K: 68904558-68908977 Panicum virgatum
Pavir.3KG535800 0.5kb downstream 0.5kb downstream 500 false Chr03K: 68904558-68905057 Panicum virgatum
Pavir.3KG535800 1.0kb upstream 1.0kb upstream 4920 true Chr03K: 68905058-68909977 Panicum virgatum
Pavir.3KG535800 1.0kb upstream 1.0kb upstream 1000 false Chr03K: 68908978-68909977 Panicum virgatum
Pavir.3KG535800 1.0kb downstream 1.0kb downstream 4920 true Chr03K: 68904058-68908977 Panicum virgatum
Pavir.3KG535800 1.0kb downstream 1.0kb downstream 1000 false Chr03K: 68904058-68905057 Panicum virgatum
Pavir.3KG535800 2.0kb upstream 2.0kb upstream 5920 true Chr03K: 68905058-68910977 Panicum virgatum
Pavir.3KG535800 2.0kb upstream 2.0kb upstream 2000 false Chr03K: 68908978-68910977 Panicum virgatum
Pavir.3KG535800 2.0kb downstream 2.0kb downstream 5920 true Chr03K: 68903058-68908977 Panicum virgatum
Pavir.3KG535800 2.0kb downstream 2.0kb downstream 2000 false Chr03K: 68903058-68905057 Panicum virgatum
Pavir.3KG535800 5.0kb upstream 5.0kb upstream 8920 true Chr03K: 68905058-68913977 Panicum virgatum
Pavir.3KG535800 5.0kb upstream 5.0kb upstream 5000 false Chr03K: 68908978-68913977 Panicum virgatum
Pavir.3KG535800 5.0kb downstream 5.0kb downstream 8920 true Chr03K: 68900058-68908977 Panicum virgatum
Pavir.3KG535800 5.0kb downstream 5.0kb downstream 5000 false Chr03K: 68900058-68905057 Panicum virgatum
Pavir.3KG535800 10.0kb upstream 10.0kb upstream 13920 true Chr03K: 68905058-68918977 Panicum virgatum
Pavir.3KG535800 10.0kb upstream 10.0kb upstream 10000 false Chr03K: 68908978-68918977 Panicum virgatum
Pavir.3KG535800 10.0kb downstream 10.0kb downstream 13920 true Chr03K: 68895058-68908977 Panicum virgatum
Pavir.3KG535800 10.0kb downstream 10.0kb downstream 10000 false Chr03K: 68895058-68905057 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122084348 5267 Panicoideae Singleton cluster - no MSA
124583267 5269 Grass View MSA
122044594 5273 Angiosperm View MSA
121310318 5274 Embryophyte View MSA
123426449 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain