Gene : Pavir.6NG071500 P. virgatum v4.1
Defline:  (1 of 27) PF00656 - Caspase domain (Peptidase_C14) Genomic Order:  643
Name:  ? Pavir.6NG071500 Secondary Identifier:  ? PAC:37648767
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.6NG071500 0.5kb upstream 0.5kb upstream 9214 true Chr06N: 13518325-13527538 Panicum virgatum
Pavir.6NG071500 0.5kb upstream 0.5kb upstream 500 false Chr06N: 13518325-13518824 Panicum virgatum
Pavir.6NG071500 0.5kb downstream 0.5kb downstream 9214 true Chr06N: 13518825-13528038 Panicum virgatum
Pavir.6NG071500 0.5kb downstream 0.5kb downstream 500 false Chr06N: 13527539-13528038 Panicum virgatum
Pavir.6NG071500 1.0kb upstream 1.0kb upstream 9714 true Chr06N: 13517825-13527538 Panicum virgatum
Pavir.6NG071500 1.0kb upstream 1.0kb upstream 1000 false Chr06N: 13517825-13518824 Panicum virgatum
Pavir.6NG071500 1.0kb downstream 1.0kb downstream 9714 true Chr06N: 13518825-13528538 Panicum virgatum
Pavir.6NG071500 1.0kb downstream 1.0kb downstream 1000 false Chr06N: 13527539-13528538 Panicum virgatum
Pavir.6NG071500 2.0kb upstream 2.0kb upstream 10714 true Chr06N: 13516825-13527538 Panicum virgatum
Pavir.6NG071500 2.0kb upstream 2.0kb upstream 2000 false Chr06N: 13516825-13518824 Panicum virgatum
Pavir.6NG071500 2.0kb downstream 2.0kb downstream 10714 true Chr06N: 13518825-13529538 Panicum virgatum
Pavir.6NG071500 2.0kb downstream 2.0kb downstream 2000 false Chr06N: 13527539-13529538 Panicum virgatum
Pavir.6NG071500 5.0kb upstream 5.0kb upstream 13714 true Chr06N: 13513825-13527538 Panicum virgatum
Pavir.6NG071500 5.0kb upstream 5.0kb upstream 5000 false Chr06N: 13513825-13518824 Panicum virgatum
Pavir.6NG071500 5.0kb downstream 5.0kb downstream 13714 true Chr06N: 13518825-13532538 Panicum virgatum
Pavir.6NG071500 5.0kb downstream 5.0kb downstream 5000 false Chr06N: 13527539-13532538 Panicum virgatum
Pavir.6NG071500 10.0kb upstream 10.0kb upstream 18714 true Chr06N: 13508825-13527538 Panicum virgatum
Pavir.6NG071500 10.0kb upstream 10.0kb upstream 10000 false Chr06N: 13508825-13518824 Panicum virgatum
Pavir.6NG071500 10.0kb downstream 10.0kb downstream 18714 true Chr06N: 13518825-13537538 Panicum virgatum
Pavir.6NG071500 10.0kb downstream 10.0kb downstream 10000 false Chr06N: 13527539-13537538 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030313 5273 Angiosperm View MSA
122099099 5267 Panicoideae Singleton cluster - no MSA
124395880 5269 Grass Singleton cluster - no MSA
123428899 5275 Viridiplantae View MSA
121350269 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain