Gene : Pavir.J016200 P. virgatum v4.1
Defline:  (1 of 28) PF05623 - Protein of unknown function (DUF789) (DUF789) Genomic Order:  2
Name:  ? Pavir.J016200 Secondary Identifier:  ? PAC:37678671
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.J016200 0.5kb upstream 0.5kb upstream 7581 true scaffold_1042: 4568-12148 Panicum virgatum
Pavir.J016200 0.5kb upstream 0.5kb upstream 500 false scaffold_1042: 4568-5067 Panicum virgatum
Pavir.J016200 0.5kb downstream 0.5kb downstream 7581 true scaffold_1042: 5068-12648 Panicum virgatum
Pavir.J016200 0.5kb downstream 0.5kb downstream 500 false scaffold_1042: 12149-12648 Panicum virgatum
Pavir.J016200 1.0kb upstream 1.0kb upstream 8081 true scaffold_1042: 4068-12148 Panicum virgatum
Pavir.J016200 1.0kb upstream 1.0kb upstream 1000 false scaffold_1042: 4068-5067 Panicum virgatum
Pavir.J016200 1.0kb downstream 1.0kb downstream 8081 true scaffold_1042: 5068-13148 Panicum virgatum
Pavir.J016200 1.0kb downstream 1.0kb downstream 1000 false scaffold_1042: 12149-13148 Panicum virgatum
Pavir.J016200 2.0kb upstream 2.0kb upstream 9081 true scaffold_1042: 3068-12148 Panicum virgatum
Pavir.J016200 2.0kb upstream 2.0kb upstream 2000 false scaffold_1042: 3068-5067 Panicum virgatum
Pavir.J016200 2.0kb downstream 2.0kb downstream 9081 true scaffold_1042: 5068-14148 Panicum virgatum
Pavir.J016200 2.0kb downstream 2.0kb downstream 2000 false scaffold_1042: 12149-14148 Panicum virgatum
Pavir.J016200 5.0kb upstream 5.0kb upstream 12081 true scaffold_1042: 68-12148 Panicum virgatum
Pavir.J016200 5.0kb upstream 5.0kb upstream 5000 false scaffold_1042: 68-5067 Panicum virgatum
Pavir.J016200 5.0kb downstream 5.0kb downstream 12081 true scaffold_1042: 5068-17148 Panicum virgatum
Pavir.J016200 5.0kb downstream 5.0kb downstream 5000 false scaffold_1042: 12149-17148 Panicum virgatum
Pavir.J016200 10.0kb upstream 10.0kb upstream 12148 true scaffold_1042: 1-12148 Panicum virgatum
Pavir.J016200 10.0kb upstream 10.0kb upstream 5067 false scaffold_1042: 1-5067 Panicum virgatum
Pavir.J016200 10.0kb downstream 10.0kb downstream 17081 true scaffold_1042: 5068-22148 Panicum virgatum
Pavir.J016200 10.0kb downstream 10.0kb downstream 10000 false scaffold_1042: 12149-22148 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181605 5267 Panicoideae View MSA
124568509 5269 Grass View MSA
122049014 5273 Angiosperm View MSA
121311208 5274 Embryophyte View MSA
123348533 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain