Gene : Thecc1EG024900 T. cacao v1.1
Defline:  (1 of 2) PTHR33493//PTHR33493:SF2 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT PROTEIN 4-5 Genomic Order:  1725
Name:  ? Thecc1EG024900 Secondary Identifier:  ? PAC:27424876
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024900 0.5kb upstream 0.5kb upstream 1636 true scaffold_5: 29432240-29433875 Theobroma cacao
Thecc1EG024900 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 29433376-29433875 Theobroma cacao
Thecc1EG024900 0.5kb downstream 0.5kb downstream 1636 true scaffold_5: 29431740-29433375 Theobroma cacao
Thecc1EG024900 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 29431740-29432239 Theobroma cacao
Thecc1EG024900 1.0kb upstream 1.0kb upstream 2136 true scaffold_5: 29432240-29434375 Theobroma cacao
Thecc1EG024900 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 29433376-29434375 Theobroma cacao
Thecc1EG024900 1.0kb downstream 1.0kb downstream 2136 true scaffold_5: 29431240-29433375 Theobroma cacao
Thecc1EG024900 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 29431240-29432239 Theobroma cacao
Thecc1EG024900 2.0kb upstream 2.0kb upstream 3136 true scaffold_5: 29432240-29435375 Theobroma cacao
Thecc1EG024900 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 29433376-29435375 Theobroma cacao
Thecc1EG024900 2.0kb downstream 2.0kb downstream 3136 true scaffold_5: 29430240-29433375 Theobroma cacao
Thecc1EG024900 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 29430240-29432239 Theobroma cacao
Thecc1EG024900 5.0kb upstream 5.0kb upstream 6136 true scaffold_5: 29432240-29438375 Theobroma cacao
Thecc1EG024900 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 29433376-29438375 Theobroma cacao
Thecc1EG024900 5.0kb downstream 5.0kb downstream 6136 true scaffold_5: 29427240-29433375 Theobroma cacao
Thecc1EG024900 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 29427240-29432239 Theobroma cacao
Thecc1EG024900 10.0kb upstream 10.0kb upstream 11136 true scaffold_5: 29432240-29443375 Theobroma cacao
Thecc1EG024900 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 29433376-29443375 Theobroma cacao
Thecc1EG024900 10.0kb downstream 10.0kb downstream 11136 true scaffold_5: 29422240-29433375 Theobroma cacao
Thecc1EG024900 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 29422240-29432239 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829497 5264 Brassicales-Malvales View MSA
124345783 5266 SBM View MSA
124245012 5268 Malvidae View MSA
124073958 5270 Rosid View MSA
123749159 5271 Pentapetalae View MSA
122794913 5272 Eudicot View MSA
122046443 5273 Angiosperm View MSA
121349982 5274 Embryophyte View MSA
123381528 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain