Gene : Pavir.6NG088400 P. virgatum v4.1
Defline:  (1 of 369) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  795
Name:  ? Pavir.6NG088400 Secondary Identifier:  ? PAC:37648354
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.6NG088400 0.5kb upstream 0.5kb upstream 7289 true Chr06N: 15597955-15605243 Panicum virgatum
Pavir.6NG088400 0.5kb upstream 0.5kb upstream 500 false Chr06N: 15597955-15598454 Panicum virgatum
Pavir.6NG088400 0.5kb downstream 0.5kb downstream 7289 true Chr06N: 15598455-15605743 Panicum virgatum
Pavir.6NG088400 0.5kb downstream 0.5kb downstream 500 false Chr06N: 15605244-15605743 Panicum virgatum
Pavir.6NG088400 1.0kb upstream 1.0kb upstream 7789 true Chr06N: 15597455-15605243 Panicum virgatum
Pavir.6NG088400 1.0kb upstream 1.0kb upstream 1000 false Chr06N: 15597455-15598454 Panicum virgatum
Pavir.6NG088400 1.0kb downstream 1.0kb downstream 7789 true Chr06N: 15598455-15606243 Panicum virgatum
Pavir.6NG088400 1.0kb downstream 1.0kb downstream 1000 false Chr06N: 15605244-15606243 Panicum virgatum
Pavir.6NG088400 2.0kb upstream 2.0kb upstream 8789 true Chr06N: 15596455-15605243 Panicum virgatum
Pavir.6NG088400 2.0kb upstream 2.0kb upstream 2000 false Chr06N: 15596455-15598454 Panicum virgatum
Pavir.6NG088400 2.0kb downstream 2.0kb downstream 8789 true Chr06N: 15598455-15607243 Panicum virgatum
Pavir.6NG088400 2.0kb downstream 2.0kb downstream 2000 false Chr06N: 15605244-15607243 Panicum virgatum
Pavir.6NG088400 5.0kb upstream 5.0kb upstream 11789 true Chr06N: 15593455-15605243 Panicum virgatum
Pavir.6NG088400 5.0kb upstream 5.0kb upstream 5000 false Chr06N: 15593455-15598454 Panicum virgatum
Pavir.6NG088400 5.0kb downstream 5.0kb downstream 11789 true Chr06N: 15598455-15610243 Panicum virgatum
Pavir.6NG088400 5.0kb downstream 5.0kb downstream 5000 false Chr06N: 15605244-15610243 Panicum virgatum
Pavir.6NG088400 10.0kb upstream 10.0kb upstream 16789 true Chr06N: 15588455-15605243 Panicum virgatum
Pavir.6NG088400 10.0kb upstream 10.0kb upstream 10000 false Chr06N: 15588455-15598454 Panicum virgatum
Pavir.6NG088400 10.0kb downstream 10.0kb downstream 16789 true Chr06N: 15598455-15615243 Panicum virgatum
Pavir.6NG088400 10.0kb downstream 10.0kb downstream 10000 false Chr06N: 15605244-15615243 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180824 5267 Panicoideae View MSA
124572611 5269 Grass View MSA
122045308 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121346704 5274 Embryophyte View MSA

0 Rna Seq Expressions

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