Gene : Thecc1EG024761 T. cacao v1.1
Defline:  (1 of 1) PTHR11062//PTHR11062:SF21 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // SUBFAMILY NOT NAMED Genomic Order:  1635
Name:  ? Thecc1EG024761 Secondary Identifier:  ? PAC:27422244
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5980 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024761 0.5kb upstream 0.5kb upstream 10274 true scaffold_5: 28390042-28400315 Theobroma cacao
Thecc1EG024761 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 28399816-28400315 Theobroma cacao
Thecc1EG024761 0.5kb downstream 0.5kb downstream 10274 true scaffold_5: 28389542-28399815 Theobroma cacao
Thecc1EG024761 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 28389542-28390041 Theobroma cacao
Thecc1EG024761 1.0kb upstream 1.0kb upstream 10774 true scaffold_5: 28390042-28400815 Theobroma cacao
Thecc1EG024761 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 28399816-28400815 Theobroma cacao
Thecc1EG024761 1.0kb downstream 1.0kb downstream 10774 true scaffold_5: 28389042-28399815 Theobroma cacao
Thecc1EG024761 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 28389042-28390041 Theobroma cacao
Thecc1EG024761 2.0kb upstream 2.0kb upstream 11774 true scaffold_5: 28390042-28401815 Theobroma cacao
Thecc1EG024761 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 28399816-28401815 Theobroma cacao
Thecc1EG024761 2.0kb downstream 2.0kb downstream 11774 true scaffold_5: 28388042-28399815 Theobroma cacao
Thecc1EG024761 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 28388042-28390041 Theobroma cacao
Thecc1EG024761 5.0kb upstream 5.0kb upstream 14774 true scaffold_5: 28390042-28404815 Theobroma cacao
Thecc1EG024761 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 28399816-28404815 Theobroma cacao
Thecc1EG024761 5.0kb downstream 5.0kb downstream 14774 true scaffold_5: 28385042-28399815 Theobroma cacao
Thecc1EG024761 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 28385042-28390041 Theobroma cacao
Thecc1EG024761 10.0kb upstream 10.0kb upstream 19774 true scaffold_5: 28390042-28409815 Theobroma cacao
Thecc1EG024761 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 28399816-28409815 Theobroma cacao
Thecc1EG024761 10.0kb downstream 10.0kb downstream 19774 true scaffold_5: 28380042-28399815 Theobroma cacao
Thecc1EG024761 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 28380042-28390041 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828108 5264 Brassicales-Malvales View MSA
124336419 5266 SBM View MSA
124238269 5268 Malvidae View MSA
124062411 5270 Rosid View MSA
123741166 5271 Pentapetalae View MSA
122787987 5272 Eudicot View MSA
122046207 5273 Angiosperm View MSA
121347306 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain