Gene : Thecc1EG024981 T. cacao v1.1
Defline:  (1 of 4) PTHR21495//PTHR21495:SF59 - NUCLEOPORIN-RELATED // DIRIGENT PROTEIN 20-RELATED Genomic Order:  1783
Name:  ? Thecc1EG024981 Secondary Identifier:  ? PAC:27421636
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG024981 0.5kb upstream 0.5kb upstream 1409 true scaffold_5: 29894538-29895946 Theobroma cacao
Thecc1EG024981 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 29894538-29895037 Theobroma cacao
Thecc1EG024981 0.5kb downstream 0.5kb downstream 1409 true scaffold_5: 29895038-29896446 Theobroma cacao
Thecc1EG024981 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 29895947-29896446 Theobroma cacao
Thecc1EG024981 1.0kb upstream 1.0kb upstream 1909 true scaffold_5: 29894038-29895946 Theobroma cacao
Thecc1EG024981 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 29894038-29895037 Theobroma cacao
Thecc1EG024981 1.0kb downstream 1.0kb downstream 1909 true scaffold_5: 29895038-29896946 Theobroma cacao
Thecc1EG024981 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 29895947-29896946 Theobroma cacao
Thecc1EG024981 2.0kb upstream 2.0kb upstream 2909 true scaffold_5: 29893038-29895946 Theobroma cacao
Thecc1EG024981 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 29893038-29895037 Theobroma cacao
Thecc1EG024981 2.0kb downstream 2.0kb downstream 2909 true scaffold_5: 29895038-29897946 Theobroma cacao
Thecc1EG024981 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 29895947-29897946 Theobroma cacao
Thecc1EG024981 5.0kb upstream 5.0kb upstream 5909 true scaffold_5: 29890038-29895946 Theobroma cacao
Thecc1EG024981 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 29890038-29895037 Theobroma cacao
Thecc1EG024981 5.0kb downstream 5.0kb downstream 5909 true scaffold_5: 29895038-29900946 Theobroma cacao
Thecc1EG024981 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 29895947-29900946 Theobroma cacao
Thecc1EG024981 10.0kb upstream 10.0kb upstream 10909 true scaffold_5: 29885038-29895946 Theobroma cacao
Thecc1EG024981 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 29885038-29895037 Theobroma cacao
Thecc1EG024981 10.0kb downstream 10.0kb downstream 10909 true scaffold_5: 29895038-29905946 Theobroma cacao
Thecc1EG024981 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 29895947-29905946 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839346 5264 Brassicales-Malvales View MSA
124322603 5266 SBM View MSA
124250728 5268 Malvidae View MSA
124074832 5270 Rosid View MSA
123751910 5271 Pentapetalae View MSA
122797233 5272 Eudicot View MSA
122051134 5273 Angiosperm View MSA
121351582 5274 Embryophyte View MSA
123382236 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain