Gene : Pavir.5KG739100 P. virgatum v4.1
Defline:  (1 of 9) PTHR11062:SF105 - BETA-1,4-XYLOSYLTRANSFERASE IRX10-RELATED Genomic Order:  6732
Name:  ? Pavir.5KG739100 Secondary Identifier:  ? PAC:37635085
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-5980 Panicum virgatum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5KG739100 0.5kb upstream 0.5kb upstream 5029 true Chr05K: 112934053-112939081 Panicum virgatum
Pavir.5KG739100 0.5kb upstream 0.5kb upstream 500 false Chr05K: 112938582-112939081 Panicum virgatum
Pavir.5KG739100 0.5kb downstream 0.5kb downstream 5029 true Chr05K: 112933553-112938581 Panicum virgatum
Pavir.5KG739100 0.5kb downstream 0.5kb downstream 500 false Chr05K: 112933553-112934052 Panicum virgatum
Pavir.5KG739100 1.0kb upstream 1.0kb upstream 5529 true Chr05K: 112934053-112939581 Panicum virgatum
Pavir.5KG739100 1.0kb upstream 1.0kb upstream 1000 false Chr05K: 112938582-112939581 Panicum virgatum
Pavir.5KG739100 1.0kb downstream 1.0kb downstream 5529 true Chr05K: 112933053-112938581 Panicum virgatum
Pavir.5KG739100 1.0kb downstream 1.0kb downstream 1000 false Chr05K: 112933053-112934052 Panicum virgatum
Pavir.5KG739100 2.0kb upstream 2.0kb upstream 6529 true Chr05K: 112934053-112940581 Panicum virgatum
Pavir.5KG739100 2.0kb upstream 2.0kb upstream 2000 false Chr05K: 112938582-112940581 Panicum virgatum
Pavir.5KG739100 2.0kb downstream 2.0kb downstream 6529 true Chr05K: 112932053-112938581 Panicum virgatum
Pavir.5KG739100 2.0kb downstream 2.0kb downstream 2000 false Chr05K: 112932053-112934052 Panicum virgatum
Pavir.5KG739100 5.0kb upstream 5.0kb upstream 9529 true Chr05K: 112934053-112943581 Panicum virgatum
Pavir.5KG739100 5.0kb upstream 5.0kb upstream 5000 false Chr05K: 112938582-112943581 Panicum virgatum
Pavir.5KG739100 5.0kb downstream 5.0kb downstream 9529 true Chr05K: 112929053-112938581 Panicum virgatum
Pavir.5KG739100 5.0kb downstream 5.0kb downstream 5000 false Chr05K: 112929053-112934052 Panicum virgatum
Pavir.5KG739100 10.0kb upstream 10.0kb upstream 14529 true Chr05K: 112934053-112948581 Panicum virgatum
Pavir.5KG739100 10.0kb upstream 10.0kb upstream 10000 false Chr05K: 112938582-112948581 Panicum virgatum
Pavir.5KG739100 10.0kb downstream 10.0kb downstream 14529 true Chr05K: 112924053-112938581 Panicum virgatum
Pavir.5KG739100 10.0kb downstream 10.0kb downstream 10000 false Chr05K: 112924053-112934052 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121993246 5273 Angiosperm View MSA
122190236 5267 Panicoideae View MSA
124576376 5269 Grass View MSA
121263540 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain