Gene : Pavir.5KG745400 P. virgatum v4.1
Defline:  (1 of 9) PTHR11062:SF105 - BETA-1,4-XYLOSYLTRANSFERASE IRX10-RELATED Genomic Order:  6787
Name:  ? Pavir.5KG745400 Secondary Identifier:  ? PAC:37636329
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-5980 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.5KG745400 0.5kb upstream 0.5kb upstream 5053 true Chr05K: 113475734-113480786 Panicum virgatum
Pavir.5KG745400 0.5kb upstream 0.5kb upstream 500 false Chr05K: 113480287-113480786 Panicum virgatum
Pavir.5KG745400 0.5kb downstream 0.5kb downstream 5053 true Chr05K: 113475234-113480286 Panicum virgatum
Pavir.5KG745400 0.5kb downstream 0.5kb downstream 500 false Chr05K: 113475234-113475733 Panicum virgatum
Pavir.5KG745400 1.0kb upstream 1.0kb upstream 5553 true Chr05K: 113475734-113481286 Panicum virgatum
Pavir.5KG745400 1.0kb upstream 1.0kb upstream 1000 false Chr05K: 113480287-113481286 Panicum virgatum
Pavir.5KG745400 1.0kb downstream 1.0kb downstream 5553 true Chr05K: 113474734-113480286 Panicum virgatum
Pavir.5KG745400 1.0kb downstream 1.0kb downstream 1000 false Chr05K: 113474734-113475733 Panicum virgatum
Pavir.5KG745400 2.0kb upstream 2.0kb upstream 6553 true Chr05K: 113475734-113482286 Panicum virgatum
Pavir.5KG745400 2.0kb upstream 2.0kb upstream 2000 false Chr05K: 113480287-113482286 Panicum virgatum
Pavir.5KG745400 2.0kb downstream 2.0kb downstream 6553 true Chr05K: 113473734-113480286 Panicum virgatum
Pavir.5KG745400 2.0kb downstream 2.0kb downstream 2000 false Chr05K: 113473734-113475733 Panicum virgatum
Pavir.5KG745400 5.0kb upstream 5.0kb upstream 9553 true Chr05K: 113475734-113485286 Panicum virgatum
Pavir.5KG745400 5.0kb upstream 5.0kb upstream 5000 false Chr05K: 113480287-113485286 Panicum virgatum
Pavir.5KG745400 5.0kb downstream 5.0kb downstream 9553 true Chr05K: 113470734-113480286 Panicum virgatum
Pavir.5KG745400 5.0kb downstream 5.0kb downstream 5000 false Chr05K: 113470734-113475733 Panicum virgatum
Pavir.5KG745400 10.0kb upstream 10.0kb upstream 14553 true Chr05K: 113475734-113490286 Panicum virgatum
Pavir.5KG745400 10.0kb upstream 10.0kb upstream 10000 false Chr05K: 113480287-113490286 Panicum virgatum
Pavir.5KG745400 10.0kb downstream 10.0kb downstream 14553 true Chr05K: 113465734-113480286 Panicum virgatum
Pavir.5KG745400 10.0kb downstream 10.0kb downstream 10000 false Chr05K: 113465734-113475733 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121993246 5273 Angiosperm View MSA
122190236 5267 Panicoideae View MSA
124576376 5269 Grass View MSA
121263540 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain