Gene : Pavir.2NG091300 P. virgatum v4.1
Defline:  (1 of 2) PTHR33180:SF4 - PHOTOSYSTEM II CP43 CHLOROPHYLL APOPROTEIN Genomic Order:  839
Name:  ? Pavir.2NG091300 Secondary Identifier:  ? PAC:37585291
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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2NG091300 0.5kb upstream 0.5kb upstream 881 true Chr02N: 13496463-13497343 Panicum virgatum
Pavir.2NG091300 0.5kb upstream 0.5kb upstream 500 false Chr02N: 13496844-13497343 Panicum virgatum
Pavir.2NG091300 0.5kb downstream 0.5kb downstream 881 true Chr02N: 13495963-13496843 Panicum virgatum
Pavir.2NG091300 0.5kb downstream 0.5kb downstream 500 false Chr02N: 13495963-13496462 Panicum virgatum
Pavir.2NG091300 1.0kb upstream 1.0kb upstream 1381 true Chr02N: 13496463-13497843 Panicum virgatum
Pavir.2NG091300 1.0kb upstream 1.0kb upstream 1000 false Chr02N: 13496844-13497843 Panicum virgatum
Pavir.2NG091300 1.0kb downstream 1.0kb downstream 1381 true Chr02N: 13495463-13496843 Panicum virgatum
Pavir.2NG091300 1.0kb downstream 1.0kb downstream 1000 false Chr02N: 13495463-13496462 Panicum virgatum
Pavir.2NG091300 2.0kb upstream 2.0kb upstream 2381 true Chr02N: 13496463-13498843 Panicum virgatum
Pavir.2NG091300 2.0kb upstream 2.0kb upstream 2000 false Chr02N: 13496844-13498843 Panicum virgatum
Pavir.2NG091300 2.0kb downstream 2.0kb downstream 2381 true Chr02N: 13494463-13496843 Panicum virgatum
Pavir.2NG091300 2.0kb downstream 2.0kb downstream 2000 false Chr02N: 13494463-13496462 Panicum virgatum
Pavir.2NG091300 5.0kb upstream 5.0kb upstream 5381 true Chr02N: 13496463-13501843 Panicum virgatum
Pavir.2NG091300 5.0kb upstream 5.0kb upstream 5000 false Chr02N: 13496844-13501843 Panicum virgatum
Pavir.2NG091300 5.0kb downstream 5.0kb downstream 5381 true Chr02N: 13491463-13496843 Panicum virgatum
Pavir.2NG091300 5.0kb downstream 5.0kb downstream 5000 false Chr02N: 13491463-13496462 Panicum virgatum
Pavir.2NG091300 10.0kb upstream 10.0kb upstream 10381 true Chr02N: 13496463-13506843 Panicum virgatum
Pavir.2NG091300 10.0kb upstream 10.0kb upstream 10000 false Chr02N: 13496844-13506843 Panicum virgatum
Pavir.2NG091300 10.0kb downstream 10.0kb downstream 10381 true Chr02N: 13486463-13496843 Panicum virgatum
Pavir.2NG091300 10.0kb downstream 10.0kb downstream 10000 false Chr02N: 13486463-13496462 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122081767 5267 Panicoideae Singleton cluster - no MSA
124380088 5269 Grass Singleton cluster - no MSA
122048462 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121310978 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain