Gene : Pavir.2NG076400 P. virgatum v4.1
Defline:  (1 of 2) K00140 - malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase (mmsA, iolA, ALDH6A1) Genomic Order:  706
Name:  ? Pavir.2NG076400 Secondary Identifier:  ? PAC:37586694
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum VALDEG-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2NG076400 0.5kb upstream 0.5kb upstream 7390 true Chr02N: 9200746-9208135 Panicum virgatum
Pavir.2NG076400 0.5kb upstream 0.5kb upstream 500 false Chr02N: 9200746-9201245 Panicum virgatum
Pavir.2NG076400 0.5kb downstream 0.5kb downstream 7390 true Chr02N: 9201246-9208635 Panicum virgatum
Pavir.2NG076400 0.5kb downstream 0.5kb downstream 500 false Chr02N: 9208136-9208635 Panicum virgatum
Pavir.2NG076400 1.0kb upstream 1.0kb upstream 7890 true Chr02N: 9200246-9208135 Panicum virgatum
Pavir.2NG076400 1.0kb upstream 1.0kb upstream 1000 false Chr02N: 9200246-9201245 Panicum virgatum
Pavir.2NG076400 1.0kb downstream 1.0kb downstream 7890 true Chr02N: 9201246-9209135 Panicum virgatum
Pavir.2NG076400 1.0kb downstream 1.0kb downstream 1000 false Chr02N: 9208136-9209135 Panicum virgatum
Pavir.2NG076400 2.0kb upstream 2.0kb upstream 8890 true Chr02N: 9199246-9208135 Panicum virgatum
Pavir.2NG076400 2.0kb upstream 2.0kb upstream 2000 false Chr02N: 9199246-9201245 Panicum virgatum
Pavir.2NG076400 2.0kb downstream 2.0kb downstream 8890 true Chr02N: 9201246-9210135 Panicum virgatum
Pavir.2NG076400 2.0kb downstream 2.0kb downstream 2000 false Chr02N: 9208136-9210135 Panicum virgatum
Pavir.2NG076400 5.0kb upstream 5.0kb upstream 11890 true Chr02N: 9196246-9208135 Panicum virgatum
Pavir.2NG076400 5.0kb upstream 5.0kb upstream 5000 false Chr02N: 9196246-9201245 Panicum virgatum
Pavir.2NG076400 5.0kb downstream 5.0kb downstream 11890 true Chr02N: 9201246-9213135 Panicum virgatum
Pavir.2NG076400 5.0kb downstream 5.0kb downstream 5000 false Chr02N: 9208136-9213135 Panicum virgatum
Pavir.2NG076400 10.0kb upstream 10.0kb upstream 16890 true Chr02N: 9191246-9208135 Panicum virgatum
Pavir.2NG076400 10.0kb upstream 10.0kb upstream 10000 false Chr02N: 9191246-9201245 Panicum virgatum
Pavir.2NG076400 10.0kb downstream 10.0kb downstream 16890 true Chr02N: 9201246-9218135 Panicum virgatum
Pavir.2NG076400 10.0kb downstream 10.0kb downstream 10000 false Chr02N: 9208136-9218135 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191677 5267 Panicoideae View MSA
124575306 5269 Grass View MSA
122044147 5273 Angiosperm View MSA
121345604 5274 Embryophyte View MSA
123424668 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain