Gene : Pavir.2NG107100 P. virgatum v4.1
Defline:  (1 of 3) PF00161//PF00652 - Ribosome inactivating protein (RIP) // Ricin-type beta-trefoil lectin domain (Ricin_B_lectin) Genomic Order:  981
Name:  ? Pavir.2NG107100 Secondary Identifier:  ? PAC:37586384
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2NG107100 0.5kb upstream 0.5kb upstream 2469 true Chr02N: 16153309-16155777 Panicum virgatum
Pavir.2NG107100 0.5kb upstream 0.5kb upstream 500 false Chr02N: 16155278-16155777 Panicum virgatum
Pavir.2NG107100 0.5kb downstream 0.5kb downstream 2469 true Chr02N: 16152809-16155277 Panicum virgatum
Pavir.2NG107100 0.5kb downstream 0.5kb downstream 500 false Chr02N: 16152809-16153308 Panicum virgatum
Pavir.2NG107100 1.0kb upstream 1.0kb upstream 2969 true Chr02N: 16153309-16156277 Panicum virgatum
Pavir.2NG107100 1.0kb upstream 1.0kb upstream 1000 false Chr02N: 16155278-16156277 Panicum virgatum
Pavir.2NG107100 1.0kb downstream 1.0kb downstream 2969 true Chr02N: 16152309-16155277 Panicum virgatum
Pavir.2NG107100 1.0kb downstream 1.0kb downstream 1000 false Chr02N: 16152309-16153308 Panicum virgatum
Pavir.2NG107100 2.0kb upstream 2.0kb upstream 3969 true Chr02N: 16153309-16157277 Panicum virgatum
Pavir.2NG107100 2.0kb upstream 2.0kb upstream 2000 false Chr02N: 16155278-16157277 Panicum virgatum
Pavir.2NG107100 2.0kb downstream 2.0kb downstream 3969 true Chr02N: 16151309-16155277 Panicum virgatum
Pavir.2NG107100 2.0kb downstream 2.0kb downstream 2000 false Chr02N: 16151309-16153308 Panicum virgatum
Pavir.2NG107100 5.0kb upstream 5.0kb upstream 6969 true Chr02N: 16153309-16160277 Panicum virgatum
Pavir.2NG107100 5.0kb upstream 5.0kb upstream 5000 false Chr02N: 16155278-16160277 Panicum virgatum
Pavir.2NG107100 5.0kb downstream 5.0kb downstream 6969 true Chr02N: 16148309-16155277 Panicum virgatum
Pavir.2NG107100 5.0kb downstream 5.0kb downstream 5000 false Chr02N: 16148309-16153308 Panicum virgatum
Pavir.2NG107100 10.0kb upstream 10.0kb upstream 11969 true Chr02N: 16153309-16165277 Panicum virgatum
Pavir.2NG107100 10.0kb upstream 10.0kb upstream 10000 false Chr02N: 16155278-16165277 Panicum virgatum
Pavir.2NG107100 10.0kb downstream 10.0kb downstream 11969 true Chr02N: 16143309-16155277 Panicum virgatum
Pavir.2NG107100 10.0kb downstream 10.0kb downstream 10000 false Chr02N: 16143309-16153308 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029645 5273 Angiosperm View MSA
122192976 5267 Panicoideae View MSA
124466430 5269 Grass View MSA
121298950 5274 Embryophyte View MSA
123336886 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain