Gene : Thecc1EG025358 T. cacao v1.1
Defline:  (1 of 33) PF00407 - Pathogenesis-related protein Bet v I family (Bet_v_1) Genomic Order:  2075
Name:  ? Thecc1EG025358 Secondary Identifier:  ? PAC:27423392
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025358 0.5kb upstream 0.5kb upstream 1401 true scaffold_5: 32102602-32104002 Theobroma cacao
Thecc1EG025358 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 32102602-32103101 Theobroma cacao
Thecc1EG025358 0.5kb downstream 0.5kb downstream 1401 true scaffold_5: 32103102-32104502 Theobroma cacao
Thecc1EG025358 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 32104003-32104502 Theobroma cacao
Thecc1EG025358 1.0kb upstream 1.0kb upstream 1901 true scaffold_5: 32102102-32104002 Theobroma cacao
Thecc1EG025358 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 32102102-32103101 Theobroma cacao
Thecc1EG025358 1.0kb downstream 1.0kb downstream 1901 true scaffold_5: 32103102-32105002 Theobroma cacao
Thecc1EG025358 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 32104003-32105002 Theobroma cacao
Thecc1EG025358 2.0kb upstream 2.0kb upstream 2901 true scaffold_5: 32101102-32104002 Theobroma cacao
Thecc1EG025358 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 32101102-32103101 Theobroma cacao
Thecc1EG025358 2.0kb downstream 2.0kb downstream 2901 true scaffold_5: 32103102-32106002 Theobroma cacao
Thecc1EG025358 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 32104003-32106002 Theobroma cacao
Thecc1EG025358 5.0kb upstream 5.0kb upstream 5901 true scaffold_5: 32098102-32104002 Theobroma cacao
Thecc1EG025358 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 32098102-32103101 Theobroma cacao
Thecc1EG025358 5.0kb downstream 5.0kb downstream 5901 true scaffold_5: 32103102-32109002 Theobroma cacao
Thecc1EG025358 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 32104003-32109002 Theobroma cacao
Thecc1EG025358 10.0kb upstream 10.0kb upstream 10901 true scaffold_5: 32093102-32104002 Theobroma cacao
Thecc1EG025358 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 32093102-32103101 Theobroma cacao
Thecc1EG025358 10.0kb downstream 10.0kb downstream 10901 true scaffold_5: 32103102-32114002 Theobroma cacao
Thecc1EG025358 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 32104003-32114002 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826870 5264 Brassicales-Malvales View MSA
124351252 5266 SBM View MSA
124249501 5268 Malvidae View MSA
124072279 5270 Rosid View MSA
123752390 5271 Pentapetalae View MSA
122797871 5272 Eudicot View MSA
122048225 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain