Gene : Pavir.2NG423700 P. virgatum v4.1

Defline:  (1 of 5) PTHR22811:SF50 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN P24BETA2 Genomic Order:  3869
Name:  ? Pavir.2NG423700 Secondary Identifier:  ? PAC:37585992

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2NG423700 0.5kb upstream 0.5kb upstream 2949 true Chr02N: 79569961-79572909 Panicum virgatum
Pavir.2NG423700 0.5kb upstream 0.5kb upstream 500 false Chr02N: 79572410-79572909 Panicum virgatum
Pavir.2NG423700 0.5kb downstream 0.5kb downstream 2949 true Chr02N: 79569461-79572409 Panicum virgatum
Pavir.2NG423700 0.5kb downstream 0.5kb downstream 500 false Chr02N: 79569461-79569960 Panicum virgatum
Pavir.2NG423700 1.0kb upstream 1.0kb upstream 3449 true Chr02N: 79569961-79573409 Panicum virgatum
Pavir.2NG423700 1.0kb upstream 1.0kb upstream 1000 false Chr02N: 79572410-79573409 Panicum virgatum
Pavir.2NG423700 1.0kb downstream 1.0kb downstream 3449 true Chr02N: 79568961-79572409 Panicum virgatum
Pavir.2NG423700 1.0kb downstream 1.0kb downstream 1000 false Chr02N: 79568961-79569960 Panicum virgatum
Pavir.2NG423700 2.0kb upstream 2.0kb upstream 4449 true Chr02N: 79569961-79574409 Panicum virgatum
Pavir.2NG423700 2.0kb upstream 2.0kb upstream 2000 false Chr02N: 79572410-79574409 Panicum virgatum
Pavir.2NG423700 2.0kb downstream 2.0kb downstream 4449 true Chr02N: 79567961-79572409 Panicum virgatum
Pavir.2NG423700 2.0kb downstream 2.0kb downstream 2000 false Chr02N: 79567961-79569960 Panicum virgatum
Pavir.2NG423700 5.0kb upstream 5.0kb upstream 7449 true Chr02N: 79569961-79577409 Panicum virgatum
Pavir.2NG423700 5.0kb upstream 5.0kb upstream 5000 false Chr02N: 79572410-79577409 Panicum virgatum
Pavir.2NG423700 5.0kb downstream 5.0kb downstream 7449 true Chr02N: 79564961-79572409 Panicum virgatum
Pavir.2NG423700 5.0kb downstream 5.0kb downstream 5000 false Chr02N: 79564961-79569960 Panicum virgatum
Pavir.2NG423700 10.0kb upstream 10.0kb upstream 12449 true Chr02N: 79569961-79582409 Panicum virgatum
Pavir.2NG423700 10.0kb upstream 10.0kb upstream 10000 false Chr02N: 79572410-79582409 Panicum virgatum
Pavir.2NG423700 10.0kb downstream 10.0kb downstream 12449 true Chr02N: 79559961-79572409 Panicum virgatum
Pavir.2NG423700 10.0kb downstream 10.0kb downstream 10000 false Chr02N: 79559961-79569960 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184792 5267 Panicoideae View MSA
124587719 5269 Grass View MSA
122045343 5273 Angiosperm View MSA
121343966 5274 Embryophyte View MSA
123427292 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain