Gene : Pavir.2NG457000 P. virgatum v4.1
Defline:  (1 of 2) 4.1.1.17 - Ornithine decarboxylase / L-ornithine carboxy-lyase Genomic Order:  4176
Name:  ? Pavir.2NG457000 Secondary Identifier:  ? PAC:37582154
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum POLYAMINSYN3-PWY Panicum virgatum pathologic  
Pvirgatum PWY-46 Panicum virgatum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.2NG457000 0.5kb upstream 0.5kb upstream 2465 true Chr02N: 82527724-82530188 Panicum virgatum
Pavir.2NG457000 0.5kb upstream 0.5kb upstream 500 false Chr02N: 82529689-82530188 Panicum virgatum
Pavir.2NG457000 0.5kb downstream 0.5kb downstream 2465 true Chr02N: 82527224-82529688 Panicum virgatum
Pavir.2NG457000 0.5kb downstream 0.5kb downstream 500 false Chr02N: 82527224-82527723 Panicum virgatum
Pavir.2NG457000 1.0kb upstream 1.0kb upstream 2965 true Chr02N: 82527724-82530688 Panicum virgatum
Pavir.2NG457000 1.0kb upstream 1.0kb upstream 1000 false Chr02N: 82529689-82530688 Panicum virgatum
Pavir.2NG457000 1.0kb downstream 1.0kb downstream 2965 true Chr02N: 82526724-82529688 Panicum virgatum
Pavir.2NG457000 1.0kb downstream 1.0kb downstream 1000 false Chr02N: 82526724-82527723 Panicum virgatum
Pavir.2NG457000 2.0kb upstream 2.0kb upstream 3965 true Chr02N: 82527724-82531688 Panicum virgatum
Pavir.2NG457000 2.0kb upstream 2.0kb upstream 2000 false Chr02N: 82529689-82531688 Panicum virgatum
Pavir.2NG457000 2.0kb downstream 2.0kb downstream 3965 true Chr02N: 82525724-82529688 Panicum virgatum
Pavir.2NG457000 2.0kb downstream 2.0kb downstream 2000 false Chr02N: 82525724-82527723 Panicum virgatum
Pavir.2NG457000 5.0kb upstream 5.0kb upstream 6965 true Chr02N: 82527724-82534688 Panicum virgatum
Pavir.2NG457000 5.0kb upstream 5.0kb upstream 5000 false Chr02N: 82529689-82534688 Panicum virgatum
Pavir.2NG457000 5.0kb downstream 5.0kb downstream 6965 true Chr02N: 82522724-82529688 Panicum virgatum
Pavir.2NG457000 5.0kb downstream 5.0kb downstream 5000 false Chr02N: 82522724-82527723 Panicum virgatum
Pavir.2NG457000 10.0kb upstream 10.0kb upstream 11965 true Chr02N: 82527724-82539688 Panicum virgatum
Pavir.2NG457000 10.0kb upstream 10.0kb upstream 10000 false Chr02N: 82529689-82539688 Panicum virgatum
Pavir.2NG457000 10.0kb downstream 10.0kb downstream 11965 true Chr02N: 82517724-82529688 Panicum virgatum
Pavir.2NG457000 10.0kb downstream 10.0kb downstream 10000 false Chr02N: 82517724-82527723 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175244 5267 Panicoideae View MSA
124578154 5269 Grass View MSA
122048449 5273 Angiosperm View MSA
121349416 5274 Embryophyte View MSA
123428095 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain