Gene : Thecc1EG025566 T. cacao v1.1
Defline:  (1 of 1) 2.1.1.95 - Tocopherol O-methyltransferase Genomic Order:  2230
Name:  ? Thecc1EG025566 Secondary Identifier:  ? PAC:27422003
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1422 Theobroma cacao pathologic  
Tcacao PWY-7436 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025566 0.5kb upstream 0.5kb upstream 4652 true scaffold_5: 33499577-33504228 Theobroma cacao
Thecc1EG025566 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 33499577-33500076 Theobroma cacao
Thecc1EG025566 0.5kb downstream 0.5kb downstream 4652 true scaffold_5: 33500077-33504728 Theobroma cacao
Thecc1EG025566 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 33504229-33504728 Theobroma cacao
Thecc1EG025566 1.0kb upstream 1.0kb upstream 5152 true scaffold_5: 33499077-33504228 Theobroma cacao
Thecc1EG025566 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 33499077-33500076 Theobroma cacao
Thecc1EG025566 1.0kb downstream 1.0kb downstream 5152 true scaffold_5: 33500077-33505228 Theobroma cacao
Thecc1EG025566 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 33504229-33505228 Theobroma cacao
Thecc1EG025566 2.0kb upstream 2.0kb upstream 6152 true scaffold_5: 33498077-33504228 Theobroma cacao
Thecc1EG025566 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 33498077-33500076 Theobroma cacao
Thecc1EG025566 2.0kb downstream 2.0kb downstream 6152 true scaffold_5: 33500077-33506228 Theobroma cacao
Thecc1EG025566 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 33504229-33506228 Theobroma cacao
Thecc1EG025566 5.0kb upstream 5.0kb upstream 9152 true scaffold_5: 33495077-33504228 Theobroma cacao
Thecc1EG025566 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 33495077-33500076 Theobroma cacao
Thecc1EG025566 5.0kb downstream 5.0kb downstream 9152 true scaffold_5: 33500077-33509228 Theobroma cacao
Thecc1EG025566 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 33504229-33509228 Theobroma cacao
Thecc1EG025566 10.0kb upstream 10.0kb upstream 14152 true scaffold_5: 33490077-33504228 Theobroma cacao
Thecc1EG025566 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 33490077-33500076 Theobroma cacao
Thecc1EG025566 10.0kb downstream 10.0kb downstream 14152 true scaffold_5: 33500077-33514228 Theobroma cacao
Thecc1EG025566 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 33504229-33514228 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839002 5264 Brassicales-Malvales View MSA
124342588 5266 SBM View MSA
124238021 5268 Malvidae View MSA
124067151 5270 Rosid View MSA
123747323 5271 Pentapetalae View MSA
122786433 5272 Eudicot View MSA
122044817 5273 Angiosperm View MSA
121347406 5274 Embryophyte View MSA
123427925 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain