Gene : Thecc1EG025929 T. cacao v1.1
Defline:  (1 of 3) PTHR10857//PTHR10857:SF26 - COPINE // PROTEIN BONZAI 3 Genomic Order:  2501
Name:  ? Thecc1EG025929 Secondary Identifier:  ? PAC:27423334
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025929 0.5kb upstream 0.5kb upstream 6200 true scaffold_5: 35562281-35568480 Theobroma cacao
Thecc1EG025929 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 35567981-35568480 Theobroma cacao
Thecc1EG025929 0.5kb downstream 0.5kb downstream 6200 true scaffold_5: 35561781-35567980 Theobroma cacao
Thecc1EG025929 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 35561781-35562280 Theobroma cacao
Thecc1EG025929 1.0kb upstream 1.0kb upstream 6700 true scaffold_5: 35562281-35568980 Theobroma cacao
Thecc1EG025929 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 35567981-35568980 Theobroma cacao
Thecc1EG025929 1.0kb downstream 1.0kb downstream 6700 true scaffold_5: 35561281-35567980 Theobroma cacao
Thecc1EG025929 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 35561281-35562280 Theobroma cacao
Thecc1EG025929 2.0kb upstream 2.0kb upstream 7700 true scaffold_5: 35562281-35569980 Theobroma cacao
Thecc1EG025929 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 35567981-35569980 Theobroma cacao
Thecc1EG025929 2.0kb downstream 2.0kb downstream 7700 true scaffold_5: 35560281-35567980 Theobroma cacao
Thecc1EG025929 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 35560281-35562280 Theobroma cacao
Thecc1EG025929 5.0kb upstream 5.0kb upstream 10700 true scaffold_5: 35562281-35572980 Theobroma cacao
Thecc1EG025929 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 35567981-35572980 Theobroma cacao
Thecc1EG025929 5.0kb downstream 5.0kb downstream 10700 true scaffold_5: 35557281-35567980 Theobroma cacao
Thecc1EG025929 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 35557281-35562280 Theobroma cacao
Thecc1EG025929 10.0kb upstream 10.0kb upstream 15700 true scaffold_5: 35562281-35577980 Theobroma cacao
Thecc1EG025929 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 35567981-35577980 Theobroma cacao
Thecc1EG025929 10.0kb downstream 10.0kb downstream 15700 true scaffold_5: 35552281-35567980 Theobroma cacao
Thecc1EG025929 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 35552281-35562280 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121781508 5273 Angiosperm View MSA
122773325 5272 Eudicot View MSA
123820225 5264 Brassicales-Malvales Singleton cluster - no MSA
124316444 5266 SBM Singleton cluster - no MSA
124255295 5268 Malvidae View MSA
124041125 5270 Rosid View MSA
123749806 5271 Pentapetalae View MSA
121351001 5274 Embryophyte View MSA
123424570 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain