Gene : Thecc1EG025915 T. cacao v1.1
Defline:  (1 of 1) PTHR10003//PTHR10003:SF31 - SUPEROXIDE DISMUTASE CU-ZN -RELATED // SUPEROXIDE DISMUTASE [CU-ZN] 3 Genomic Order:  2487
Name:  ? Thecc1EG025915 Secondary Identifier:  ? PAC:27424715
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao DETOX1-PWY Theobroma cacao pathologic  
Tcacao DETOX1-PWY-1 Theobroma cacao pathologic  
Tcacao PWY-6854 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG025915 0.5kb upstream 0.5kb upstream 4277 true scaffold_5: 35471463-35475739 Theobroma cacao
Thecc1EG025915 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 35471463-35471962 Theobroma cacao
Thecc1EG025915 0.5kb downstream 0.5kb downstream 4277 true scaffold_5: 35471963-35476239 Theobroma cacao
Thecc1EG025915 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 35475740-35476239 Theobroma cacao
Thecc1EG025915 1.0kb upstream 1.0kb upstream 4777 true scaffold_5: 35470963-35475739 Theobroma cacao
Thecc1EG025915 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 35470963-35471962 Theobroma cacao
Thecc1EG025915 1.0kb downstream 1.0kb downstream 4777 true scaffold_5: 35471963-35476739 Theobroma cacao
Thecc1EG025915 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 35475740-35476739 Theobroma cacao
Thecc1EG025915 2.0kb upstream 2.0kb upstream 5777 true scaffold_5: 35469963-35475739 Theobroma cacao
Thecc1EG025915 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 35469963-35471962 Theobroma cacao
Thecc1EG025915 2.0kb downstream 2.0kb downstream 5777 true scaffold_5: 35471963-35477739 Theobroma cacao
Thecc1EG025915 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 35475740-35477739 Theobroma cacao
Thecc1EG025915 5.0kb upstream 5.0kb upstream 8777 true scaffold_5: 35466963-35475739 Theobroma cacao
Thecc1EG025915 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 35466963-35471962 Theobroma cacao
Thecc1EG025915 5.0kb downstream 5.0kb downstream 8777 true scaffold_5: 35471963-35480739 Theobroma cacao
Thecc1EG025915 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 35475740-35480739 Theobroma cacao
Thecc1EG025915 10.0kb upstream 10.0kb upstream 13777 true scaffold_5: 35461963-35475739 Theobroma cacao
Thecc1EG025915 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 35461963-35471962 Theobroma cacao
Thecc1EG025915 10.0kb downstream 10.0kb downstream 13777 true scaffold_5: 35471963-35485739 Theobroma cacao
Thecc1EG025915 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 35475740-35485739 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834342 5264 Brassicales-Malvales View MSA
124349995 5266 SBM View MSA
124244672 5268 Malvidae View MSA
124071759 5270 Rosid View MSA
123743890 5271 Pentapetalae View MSA
122797763 5272 Eudicot View MSA
122047736 5273 Angiosperm View MSA
121347419 5274 Embryophyte View MSA
123427939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain