Gene : Pavir.9NG380900 P. virgatum v4.1
Defline:  (1 of 2) PTHR11777:SF18 - ALANINE--TRNA LIGASE, CYTOPLASMIC Genomic Order:  3477
Name:  ? Pavir.9NG380900 Secondary Identifier:  ? PAC:37658290
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum TRNA-CHARGING-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.9NG380900 0.5kb upstream 0.5kb upstream 13087 true Chr09N: 56432237-56445323 Panicum virgatum
Pavir.9NG380900 0.5kb upstream 0.5kb upstream 500 false Chr09N: 56432237-56432736 Panicum virgatum
Pavir.9NG380900 0.5kb downstream 0.5kb downstream 13087 true Chr09N: 56432737-56445823 Panicum virgatum
Pavir.9NG380900 0.5kb downstream 0.5kb downstream 500 false Chr09N: 56445324-56445823 Panicum virgatum
Pavir.9NG380900 1.0kb upstream 1.0kb upstream 13587 true Chr09N: 56431737-56445323 Panicum virgatum
Pavir.9NG380900 1.0kb upstream 1.0kb upstream 1000 false Chr09N: 56431737-56432736 Panicum virgatum
Pavir.9NG380900 1.0kb downstream 1.0kb downstream 13587 true Chr09N: 56432737-56446323 Panicum virgatum
Pavir.9NG380900 1.0kb downstream 1.0kb downstream 1000 false Chr09N: 56445324-56446323 Panicum virgatum
Pavir.9NG380900 2.0kb upstream 2.0kb upstream 14587 true Chr09N: 56430737-56445323 Panicum virgatum
Pavir.9NG380900 2.0kb upstream 2.0kb upstream 2000 false Chr09N: 56430737-56432736 Panicum virgatum
Pavir.9NG380900 2.0kb downstream 2.0kb downstream 14587 true Chr09N: 56432737-56447323 Panicum virgatum
Pavir.9NG380900 2.0kb downstream 2.0kb downstream 2000 false Chr09N: 56445324-56447323 Panicum virgatum
Pavir.9NG380900 5.0kb upstream 5.0kb upstream 17587 true Chr09N: 56427737-56445323 Panicum virgatum
Pavir.9NG380900 5.0kb upstream 5.0kb upstream 5000 false Chr09N: 56427737-56432736 Panicum virgatum
Pavir.9NG380900 5.0kb downstream 5.0kb downstream 17587 true Chr09N: 56432737-56450323 Panicum virgatum
Pavir.9NG380900 5.0kb downstream 5.0kb downstream 5000 false Chr09N: 56445324-56450323 Panicum virgatum
Pavir.9NG380900 10.0kb upstream 10.0kb upstream 22587 true Chr09N: 56422737-56445323 Panicum virgatum
Pavir.9NG380900 10.0kb upstream 10.0kb upstream 10000 false Chr09N: 56422737-56432736 Panicum virgatum
Pavir.9NG380900 10.0kb downstream 10.0kb downstream 22587 true Chr09N: 56432737-56455323 Panicum virgatum
Pavir.9NG380900 10.0kb downstream 10.0kb downstream 10000 false Chr09N: 56445324-56455323 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184720 5267 Panicoideae View MSA
124569806 5269 Grass View MSA
122047019 5273 Angiosperm View MSA
121346985 5274 Embryophyte View MSA
123424131 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain