Protein : Pavir.9NG380900.1.p P. virgatum v4.1
Secondary Identifier:  PAC:37658290 Organism Name:  Panicum virgatum
Length:  1004   Name:  Pavir.9NG380900.1.p
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SummaryProteinsOther
 

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Proteins

8 Protein Domains

DB identifier Type Name
IPR002318 Family Alanine-tRNA ligase, class IIc
IPR003156 Domain DHHA1 domain
IPR018162 Domain Alanine-tRNA ligase, class IIc, anti-codon-binding domain
IPR009000 Domain Translation protein, beta-barrel domain
IPR012947 Domain Threonyl/alanyl tRNA synthetase, SAD
IPR018163 Domain Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain
IPR018165 Domain Alanyl-tRNA synthetase, class IIc, core domain
IPR018164 Domain Alanyl-tRNA synthetase, class IIc, N-terminal
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Pavir.9NG380900.1_CDS 3015   Chr09N: 56432780-56445018 Panicum virgatum

38 Ontology Annotations

Ontology Term Db Gene/Protein Name
SSF55186 SSF Pavir.9NG380900.1.p
SSF50447 SSF Pavir.9NG380900.1.p
SSF101353 SSF Pavir.9NG380900.1.p
SM00863 SMART Pavir.9NG380900.1.p
TIGR00344 TIGRFAMs Pavir.9NG380900.1.p
SSF55681 SSF Pavir.9NG380900.1.p
PF01411 PFAM Pavir.9NG380900.1.p
TRNA-CHARGING-PWY Pathway Pavir.9NG380900.1.p
PTHR11777:SF18 PANTHER Pavir.9NG380900.1.p
PTHR11777 PANTHER Pavir.9NG380900.1.p
PS50860 PROFILE Pavir.9NG380900.1.p
PR00980 PRINTS Pavir.9NG380900.1.p
PF07973 PFAM Pavir.9NG380900.1.p
PF02272 PFAM Pavir.9NG380900.1.p
IPR018163 InterPro Pavir.9NG380900.1.p
IPR018162 InterPro Pavir.9NG380900.1.p
IPR012947 InterPro Pavir.9NG380900.1.p
IPR009000 InterPro Pavir.9NG380900.1.p
ALANINE--TRNA-LIGASE-RXN METACYC Pavir.9NG380900.1.p
K01872 KEGG Pavir.9NG380900.1.p
IPR018165 InterPro Pavir.9NG380900.1.p
IPR018164 InterPro Pavir.9NG380900.1.p
GO:0006419 GO Pavir.9NG380900.1.p
GO:0005737 GO Pavir.9NG380900.1.p
GO:0005524 GO Pavir.9NG380900.1.p
GO:0004813 GO Pavir.9NG380900.1.p
IPR003156 InterPro Pavir.9NG380900.1.p
IPR002318 InterPro Pavir.9NG380900.1.p
GO:0043039 GO Pavir.9NG380900.1.p
GO:0016876 GO Pavir.9NG380900.1.p

1 Pathway Components

Type Key Level Step
      84

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum TRNA-CHARGING-PWY Panicum virgatum pathologic