Gene : Pavir.9NG628200 P. virgatum v4.1
Defline:  (1 of 4) K12198 - charged multivesicular body protein 5 (CHMP5, VPS60) Genomic Order:  6553
Name:  ? Pavir.9NG628200 Secondary Identifier:  ? PAC:37651929
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.9NG628200 0.5kb upstream 0.5kb upstream 3466 true Chr09N: 108921794-108925259 Panicum virgatum
Pavir.9NG628200 0.5kb upstream 0.5kb upstream 500 false Chr09N: 108924760-108925259 Panicum virgatum
Pavir.9NG628200 0.5kb downstream 0.5kb downstream 3466 true Chr09N: 108921294-108924759 Panicum virgatum
Pavir.9NG628200 0.5kb downstream 0.5kb downstream 500 false Chr09N: 108921294-108921793 Panicum virgatum
Pavir.9NG628200 1.0kb upstream 1.0kb upstream 3966 true Chr09N: 108921794-108925759 Panicum virgatum
Pavir.9NG628200 1.0kb upstream 1.0kb upstream 1000 false Chr09N: 108924760-108925759 Panicum virgatum
Pavir.9NG628200 1.0kb downstream 1.0kb downstream 3966 true Chr09N: 108920794-108924759 Panicum virgatum
Pavir.9NG628200 1.0kb downstream 1.0kb downstream 1000 false Chr09N: 108920794-108921793 Panicum virgatum
Pavir.9NG628200 2.0kb upstream 2.0kb upstream 4966 true Chr09N: 108921794-108926759 Panicum virgatum
Pavir.9NG628200 2.0kb upstream 2.0kb upstream 2000 false Chr09N: 108924760-108926759 Panicum virgatum
Pavir.9NG628200 2.0kb downstream 2.0kb downstream 4966 true Chr09N: 108919794-108924759 Panicum virgatum
Pavir.9NG628200 2.0kb downstream 2.0kb downstream 2000 false Chr09N: 108919794-108921793 Panicum virgatum
Pavir.9NG628200 5.0kb upstream 5.0kb upstream 7966 true Chr09N: 108921794-108929759 Panicum virgatum
Pavir.9NG628200 5.0kb upstream 5.0kb upstream 5000 false Chr09N: 108924760-108929759 Panicum virgatum
Pavir.9NG628200 5.0kb downstream 5.0kb downstream 7966 true Chr09N: 108916794-108924759 Panicum virgatum
Pavir.9NG628200 5.0kb downstream 5.0kb downstream 5000 false Chr09N: 108916794-108921793 Panicum virgatum
Pavir.9NG628200 10.0kb upstream 10.0kb upstream 12966 true Chr09N: 108921794-108934759 Panicum virgatum
Pavir.9NG628200 10.0kb upstream 10.0kb upstream 10000 false Chr09N: 108924760-108934759 Panicum virgatum
Pavir.9NG628200 10.0kb downstream 10.0kb downstream 12966 true Chr09N: 108911794-108924759 Panicum virgatum
Pavir.9NG628200 10.0kb downstream 10.0kb downstream 10000 false Chr09N: 108911794-108921793 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122099948 5267 Panicoideae Singleton cluster - no MSA
124582350 5269 Grass View MSA
122046094 5273 Angiosperm View MSA
121350870 5274 Embryophyte View MSA
123426524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain