Gene : Pavir.6KG007800 P. virgatum v4.1
Defline:  (1 of 31) PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  72
Name:  ? Pavir.6KG007800 Secondary Identifier:  ? PAC:37694940
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.6KG007800 0.5kb upstream 0.5kb upstream 5773 true Chr06K: 1082564-1088336 Panicum virgatum
Pavir.6KG007800 0.5kb upstream 0.5kb upstream 500 false Chr06K: 1082564-1083063 Panicum virgatum
Pavir.6KG007800 0.5kb downstream 0.5kb downstream 5773 true Chr06K: 1083064-1088836 Panicum virgatum
Pavir.6KG007800 0.5kb downstream 0.5kb downstream 500 false Chr06K: 1088337-1088836 Panicum virgatum
Pavir.6KG007800 1.0kb upstream 1.0kb upstream 6273 true Chr06K: 1082064-1088336 Panicum virgatum
Pavir.6KG007800 1.0kb upstream 1.0kb upstream 1000 false Chr06K: 1082064-1083063 Panicum virgatum
Pavir.6KG007800 1.0kb downstream 1.0kb downstream 6273 true Chr06K: 1083064-1089336 Panicum virgatum
Pavir.6KG007800 1.0kb downstream 1.0kb downstream 1000 false Chr06K: 1088337-1089336 Panicum virgatum
Pavir.6KG007800 2.0kb upstream 2.0kb upstream 7273 true Chr06K: 1081064-1088336 Panicum virgatum
Pavir.6KG007800 2.0kb upstream 2.0kb upstream 2000 false Chr06K: 1081064-1083063 Panicum virgatum
Pavir.6KG007800 2.0kb downstream 2.0kb downstream 7273 true Chr06K: 1083064-1090336 Panicum virgatum
Pavir.6KG007800 2.0kb downstream 2.0kb downstream 2000 false Chr06K: 1088337-1090336 Panicum virgatum
Pavir.6KG007800 5.0kb upstream 5.0kb upstream 10273 true Chr06K: 1078064-1088336 Panicum virgatum
Pavir.6KG007800 5.0kb upstream 5.0kb upstream 5000 false Chr06K: 1078064-1083063 Panicum virgatum
Pavir.6KG007800 5.0kb downstream 5.0kb downstream 10273 true Chr06K: 1083064-1093336 Panicum virgatum
Pavir.6KG007800 5.0kb downstream 5.0kb downstream 5000 false Chr06K: 1088337-1093336 Panicum virgatum
Pavir.6KG007800 10.0kb upstream 10.0kb upstream 15273 true Chr06K: 1073064-1088336 Panicum virgatum
Pavir.6KG007800 10.0kb upstream 10.0kb upstream 10000 false Chr06K: 1073064-1083063 Panicum virgatum
Pavir.6KG007800 10.0kb downstream 10.0kb downstream 15273 true Chr06K: 1083064-1098336 Panicum virgatum
Pavir.6KG007800 10.0kb downstream 10.0kb downstream 10000 false Chr06K: 1088337-1098336 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196602 5267 Panicoideae View MSA
124585163 5269 Grass View MSA
122048876 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain