Gene : Pavir.1KG176200 P. virgatum v4.1
Defline:  (1 of 1) PF00027//PF00520//PF11834 - Cyclic nucleotide-binding domain (cNMP_binding) // Ion transport protein (Ion_trans) // KHA, dimerisation domain of potassium ion channel (KHA) Genomic Order:  1331
Name:  ? Pavir.1KG176200 Secondary Identifier:  ? PAC:37666283
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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1KG176200 0.5kb upstream 0.5kb upstream 4246 true Chr01K: 15348212-15352457 Panicum virgatum
Pavir.1KG176200 0.5kb upstream 0.5kb upstream 500 false Chr01K: 15351958-15352457 Panicum virgatum
Pavir.1KG176200 0.5kb downstream 0.5kb downstream 4246 true Chr01K: 15347712-15351957 Panicum virgatum
Pavir.1KG176200 0.5kb downstream 0.5kb downstream 500 false Chr01K: 15347712-15348211 Panicum virgatum
Pavir.1KG176200 1.0kb upstream 1.0kb upstream 4746 true Chr01K: 15348212-15352957 Panicum virgatum
Pavir.1KG176200 1.0kb upstream 1.0kb upstream 1000 false Chr01K: 15351958-15352957 Panicum virgatum
Pavir.1KG176200 1.0kb downstream 1.0kb downstream 4746 true Chr01K: 15347212-15351957 Panicum virgatum
Pavir.1KG176200 1.0kb downstream 1.0kb downstream 1000 false Chr01K: 15347212-15348211 Panicum virgatum
Pavir.1KG176200 2.0kb upstream 2.0kb upstream 5746 true Chr01K: 15348212-15353957 Panicum virgatum
Pavir.1KG176200 2.0kb upstream 2.0kb upstream 2000 false Chr01K: 15351958-15353957 Panicum virgatum
Pavir.1KG176200 2.0kb downstream 2.0kb downstream 5746 true Chr01K: 15346212-15351957 Panicum virgatum
Pavir.1KG176200 2.0kb downstream 2.0kb downstream 2000 false Chr01K: 15346212-15348211 Panicum virgatum
Pavir.1KG176200 5.0kb upstream 5.0kb upstream 8746 true Chr01K: 15348212-15356957 Panicum virgatum
Pavir.1KG176200 5.0kb upstream 5.0kb upstream 5000 false Chr01K: 15351958-15356957 Panicum virgatum
Pavir.1KG176200 5.0kb downstream 5.0kb downstream 8746 true Chr01K: 15343212-15351957 Panicum virgatum
Pavir.1KG176200 5.0kb downstream 5.0kb downstream 5000 false Chr01K: 15343212-15348211 Panicum virgatum
Pavir.1KG176200 10.0kb upstream 10.0kb upstream 13746 true Chr01K: 15348212-15361957 Panicum virgatum
Pavir.1KG176200 10.0kb upstream 10.0kb upstream 10000 false Chr01K: 15351958-15361957 Panicum virgatum
Pavir.1KG176200 10.0kb downstream 10.0kb downstream 13746 true Chr01K: 15338212-15351957 Panicum virgatum
Pavir.1KG176200 10.0kb downstream 10.0kb downstream 10000 false Chr01K: 15338212-15348211 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195096 5267 Panicoideae View MSA
124572952 5269 Grass View MSA
122043816 5273 Angiosperm View MSA
121310193 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain